31 May 2022 16:01:00,819 INFO : Validating data for a ProteomeXchange submission.
31 May 2022 16:01:00,821 INFO : =======================================
31 May 2022 16:01:00,973 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask' at location 'webserver'
31 May 2022 16:01:00,975 INFO : Validating data for experiment Id: 1347, validation Id: 51
31 May 2022 16:01:01,025 INFO : Validating data for 1 Skyline documents in 1 folders
31 May 2022 16:01:01,079 INFO : Sample file validation for Skyline document: 20210831_Lena_Hess_MS275_samples_final_quan_3transitions_2021-12-03_11-03-45.sky.zip
31 May 2022 16:01:01,079 INFO : Found all sample files.
31 May 2022 16:01:01,128 INFO : Modifications validation:
31 May 2022 16:01:01,129 INFO : VALID MODIFICATIONS:
31 May 2022 16:01:01,129 INFO : 211: Met-loss (Protein N-term M): UNIMOD:765 - Met-loss
31 May 2022 16:01:01,129 INFO : 20210831_Lena_Hess_MS275_samples_final_quan_3transitions_2021-12-03_11-03-45.sky.zip
31 May 2022 16:01:01,129 INFO : 212: Acetyl (N-term): UNIMOD:1 - Acetyl
31 May 2022 16:01:01,129 INFO : 20210831_Lena_Hess_MS275_samples_final_quan_3transitions_2021-12-03_11-03-45.sky.zip
31 May 2022 16:01:01,129 INFO : 213: Acetyl (K): UNIMOD:1 - Acetyl
31 May 2022 16:01:01,129 INFO : 20210831_Lena_Hess_MS275_samples_final_quan_3transitions_2021-12-03_11-03-45.sky.zip
31 May 2022 16:01:01,129 INFO : INVALID MODIFICATIONS (No Unimod ID):
31 May 2022 16:01:01,219 INFO : Spectral library validation:
31 May 2022 16:01:01,219 INFO : '20210831_Lena_Hess_MS275_samples_final_quan_3transitions' (20210831_Lena_Hess_MS275_samples_final_quan_3transitions.blib) library in 1 Skyline documents was built with 13 raw files; 3 peptide Id files. Status: Missing spectrum and peptide Id files.
31 May 2022 16:01:01,219 INFO : MISSING FILES:
31 May 2022 16:01:01,219 INFO : Spectrum File: 20210625_E3_RSLC6_Hess_SeiserextUni_MPL_PRM_MS275_test_list1_plusiRT.raw
31 May 2022 16:01:01,219 INFO : Spectrum File: 20210625_E3_RSLC6_Hess_SeiserextUni_MPL_PRM_MS275_test_list2_plusiRT.raw
31 May 2022 16:01:01,219 INFO : Spectrum File: 20210701_E3_RSLC6_Hess_SeiserextUni_MPL_PRM_MS275_test2_list1_plusiRT.raw
31 May 2022 16:01:01,219 INFO : Spectrum File: 20210701_E3_RSLC6_Hess_SeiserextUni_MPL_PRM_MS275_test2_list2_plusiRT.raw
31 May 2022 16:01:01,219 INFO : Spectrum File: 20210716_QExHFX2_RSLC1_Hess_SeiserextUni_MPL_PRM_MS275_test3_DDA.raw
31 May 2022 16:01:01,219 INFO : Spectrum File: 20210716_QExHFX2_RSLC1_Hess_SeiserextUni_MPL_PRM_MS275_test3_histones_new_list1_plusiRT.raw
31 May 2022 16:01:01,219 INFO : Spectrum File: 20210716_QExHFX2_RSLC1_Hess_SeiserextUni_MPL_PRM_MS275_test3_histones_new_list2_plusiRT.raw
31 May 2022 16:01:01,219 INFO : Spectrum File: 20210716_QExHFX2_RSLC1_Hess_SeiserextUni_MPL_PRM_MS275_test3_histones_old_list1_plusiRT.raw
31 May 2022 16:01:01,219 INFO : Spectrum File: 20210716_QExHFX2_RSLC1_Hess_SeiserextUni_MPL_PRM_MS275_test3_histones_old_list2_plusiRT.raw
31 May 2022 16:01:01,219 INFO : Spectrum File: 20210726_QExHFX2_LC4_Hess_SeiserextUni_MPL_PRM_MS275_test4_list1_low_masses_plus_iRT.raw
31 May 2022 16:01:01,219 INFO : Spectrum File: 20210726_QExHFX2_LC4_Hess_SeiserextUni_MPL_PRM_MS275_test4_list2_plus_iRT.raw
31 May 2022 16:01:01,219 INFO : Spectrum File: 20210726_QExHFX2_LC4_Hess_SeiserextUni_MPL_PRM_MS275_test4_list3_plus_iRT.raw
31 May 2022 16:01:01,219 INFO : Spectrum File: 20210726_QExHFX2_LC4_Hess_SeiserextUni_MPL_PRM_MS275_test4_list4_plus_iRT.raw
31 May 2022 16:01:01,219 INFO : Peptide Id File: msms.txt
31 May 2022 16:01:01,219 INFO : Peptide Id File: mqpar.xml
31 May 2022 16:01:01,220 INFO : Peptide Id File: evidence.txt
31 May 2022 16:01:01,220 INFO : Data validation is complete. Status is IncompleteMetadata
31 May 2022 16:01:01,220 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask'