Skyline document import - 2_Plasma_Lipid_Library_Negative.sky.zip: /Panorama Public/2021/NCSU Baker Lab

Skyline document import - 2_Plasma_Lipid_Library_Negative.sky.zip

NCSU Baker Lab - Lipid Libraries

Job Status

Created:

2021-02-27 10:58:23

Modified:

2021-09-29 08:31:59

Email:

vsharma@uw.edu

Status:

COMPLETE

Info:

Description:

Skyline document import - 2_Plasma_Lipid_Library_Negative.sky.zip

File Path:

/data/labkey/files/Panorama Public/2021/NCSU Baker Lab - Lipid Libraries/@files/2_Plasma_Lipid_Library_Negative.sky_2021-02-27_10-58-23.log

Files:

2_Plasma_Lipid_Library_Negative.sky_2021-02-27_10-58-23.log

Join job:

Status	Description

Split jobs:

Status	Description

Completed Runs:

2_Plasma_Lipid_Library_Negative.sky.zip

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Log File

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27 Feb 2021 10:58:24,848 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'

27 Feb 2021 10:58:24,870 INFO : Starting to import Skyline document from 2_Plasma_Lipid_Library_Negative.sky.zip

27 Feb 2021 10:58:24,880 INFO : Expanding Negative_Plasma_Lipid_iRT.irtdb

27 Feb 2021 10:58:24,899 INFO : Expanding Plasma_Lipids_Negative.blib

27 Feb 2021 10:58:24,924 INFO : Expanding 2_Plasma_Lipid_Library_Negative.sky.view

27 Feb 2021 10:58:24,955 INFO : Expanding 2_Plasma_Lipid_Library_Negative.sky

27 Feb 2021 10:58:24,981 INFO : Expanding 2_Plasma_Lipid_Library_Negative.skyl

27 Feb 2021 10:58:25,037 WARN : The version of this Skyline document is 20.22. This is newer than the highest supported version 20.2

27 Feb 2021 10:58:25,048 INFO : 2% Done

27 Feb 2021 10:58:25,060 WARN : Unable to find file /data/labkey/files/Panorama Public/2021/NCSU Baker Lab - Lipid Libraries/@files/2_Plasma_Lipid_Library_Negative/2_Plasma_Lipid_Library_Negative.skyd, unable to import chromatograms

27 Feb 2021 10:58:25,443 INFO : Inserting Cer (Ceramide)

27 Feb 2021 10:58:25,498 INFO : 3% Done

27 Feb 2021 10:58:25,551 INFO : 4% Done

27 Feb 2021 10:58:25,601 INFO : 5% Done

27 Feb 2021 10:58:25,676 INFO : 6% Done

27 Feb 2021 10:58:25,723 INFO : 7% Done

27 Feb 2021 10:58:25,795 INFO : 8% Done

27 Feb 2021 10:58:25,844 INFO : 9% Done

27 Feb 2021 10:58:25,892 INFO : 10% Done

27 Feb 2021 10:58:25,939 INFO : 11% Done

27 Feb 2021 10:58:26,027 INFO : 12% Done

27 Feb 2021 10:58:26,074 INFO : 13% Done

27 Feb 2021 10:58:26,121 INFO : 14% Done

27 Feb 2021 10:58:26,206 DEBUG: Total molecules inserted: 16

27 Feb 2021 10:58:26,207 INFO : Inserting FA (Fatty acyl)

27 Feb 2021 10:58:26,227 INFO : 15% Done

27 Feb 2021 10:58:26,282 INFO : 16% Done

27 Feb 2021 10:58:26,328 INFO : 17% Done

27 Feb 2021 10:58:26,432 INFO : 18% Done

27 Feb 2021 10:58:26,487 INFO : 19% Done

27 Feb 2021 10:58:26,534 INFO : 20% Done

27 Feb 2021 10:58:26,585 DEBUG: Inserted 50 molecules

27 Feb 2021 10:58:26,600 DEBUG: Total molecules inserted: 51

27 Feb 2021 10:58:26,601 INFO : Inserting GM3 (Ganglioside)

27 Feb 2021 10:58:26,623 INFO : 21% Done

27 Feb 2021 10:58:26,671 DEBUG: Total molecules inserted: 4

27 Feb 2021 10:58:26,672 INFO : Inserting HexCer (Glc/Glu Glycosphingolipid)

27 Feb 2021 10:58:26,679 INFO : 23% Done

27 Feb 2021 10:58:26,786 INFO : 24% Done

27 Feb 2021 10:58:26,850 INFO : 25% Done

27 Feb 2021 10:58:26,914 INFO : 26% Done

27 Feb 2021 10:58:27,036 INFO : 27% Done

27 Feb 2021 10:58:27,100 INFO : 29% Done

27 Feb 2021 10:58:27,159 DEBUG: Total molecules inserted: 8

27 Feb 2021 10:58:27,160 INFO : Inserting LPC (Lyso phosphatidylcholine)

27 Feb 2021 10:58:27,243 INFO : 30% Done

27 Feb 2021 10:58:27,287 INFO : 31% Done

27 Feb 2021 10:58:27,346 INFO : 32% Done

27 Feb 2021 10:58:27,444 INFO : 33% Done

27 Feb 2021 10:58:27,487 INFO : 34% Done

27 Feb 2021 10:58:27,526 DEBUG: Total molecules inserted: 26

27 Feb 2021 10:58:27,528 INFO : Inserting LPE (Lyso phosphatidylethanolamine)

27 Feb 2021 10:58:27,549 INFO : 35% Done

27 Feb 2021 10:58:27,650 INFO : 36% Done

27 Feb 2021 10:58:27,699 INFO : 37% Done

27 Feb 2021 10:58:27,729 DEBUG: Total molecules inserted: 12

27 Feb 2021 10:58:27,731 INFO : Inserting PA (Phosphatidic acid)

27 Feb 2021 10:58:27,738 INFO : 38% Done

27 Feb 2021 10:58:27,757 DEBUG: Total molecules inserted: 1

27 Feb 2021 10:58:27,759 INFO : Inserting PC (Phosphatidylcholine)

27 Feb 2021 10:58:27,834 INFO : 39% Done

27 Feb 2021 10:58:27,888 INFO : 40% Done

27 Feb 2021 10:58:27,930 INFO : 41% Done

27 Feb 2021 10:58:28,008 INFO : 42% Done

27 Feb 2021 10:58:28,057 INFO : 43% Done

27 Feb 2021 10:58:28,119 INFO : 44% Done

27 Feb 2021 10:58:28,197 INFO : 45% Done

27 Feb 2021 10:58:28,239 INFO : 46% Done

27 Feb 2021 10:58:28,282 INFO : 47% Done

27 Feb 2021 10:58:28,362 INFO : 48% Done

27 Feb 2021 10:58:28,404 INFO : 49% Done

27 Feb 2021 10:58:28,457 INFO : 50% Done

27 Feb 2021 10:58:28,520 INFO : 51% Done

27 Feb 2021 10:58:28,622 INFO : 52% Done

27 Feb 2021 10:58:28,657 INFO : 53% Done

27 Feb 2021 10:58:28,701 INFO : 54% Done

27 Feb 2021 10:58:28,796 INFO : 55% Done

27 Feb 2021 10:58:28,797 DEBUG: Inserted 50 molecules

27 Feb 2021 10:58:28,841 INFO : 56% Done

27 Feb 2021 10:58:28,883 INFO : 57% Done

27 Feb 2021 10:58:28,903 DEBUG: Total molecules inserted: 54

27 Feb 2021 10:58:28,904 INFO : Inserting PC(O/P-) (Akyl/alkenyl ether phosphatidylcholine)

27 Feb 2021 10:58:28,968 INFO : 58% Done

27 Feb 2021 10:58:29,008 INFO : 59% Done

27 Feb 2021 10:58:29,047 INFO : 60% Done

27 Feb 2021 10:58:29,143 INFO : 61% Done

27 Feb 2021 10:58:29,190 INFO : 62% Done

27 Feb 2021 10:58:29,230 INFO : 63% Done

27 Feb 2021 10:58:29,318 INFO : 64% Done

27 Feb 2021 10:58:29,330 DEBUG: Total molecules inserted: 22

27 Feb 2021 10:58:29,331 INFO : Inserting PE (Phosphatidylethanolamine)

27 Feb 2021 10:58:29,371 INFO : 65% Done

27 Feb 2021 10:58:29,473 INFO : 66% Done

27 Feb 2021 10:58:29,559 INFO : 67% Done

27 Feb 2021 10:58:29,612 INFO : 68% Done

27 Feb 2021 10:58:29,650 INFO : 69% Done

27 Feb 2021 10:58:29,742 INFO : 70% Done

27 Feb 2021 10:58:29,795 INFO : 71% Done

27 Feb 2021 10:58:29,840 INFO : 72% Done

27 Feb 2021 10:58:29,925 INFO : 73% Done

27 Feb 2021 10:58:29,979 INFO : 74% Done

27 Feb 2021 10:58:30,105 INFO : 75% Done

27 Feb 2021 10:58:30,147 INFO : 76% Done

27 Feb 2021 10:58:30,190 INFO : 77% Done

27 Feb 2021 10:58:30,209 DEBUG: Total molecules inserted: 44

27 Feb 2021 10:58:30,210 INFO : Inserting PE(O/P-) (Alkyl/alkenyl ether phosphatidylethanolamine)

27 Feb 2021 10:58:30,233 INFO : 78% Done

27 Feb 2021 10:58:30,317 INFO : 79% Done

27 Feb 2021 10:58:30,369 INFO : 80% Done

27 Feb 2021 10:58:30,420 INFO : 81% Done

27 Feb 2021 10:58:30,505 INFO : 82% Done

27 Feb 2021 10:58:30,542 INFO : 83% Done

27 Feb 2021 10:58:30,595 INFO : 84% Done

27 Feb 2021 10:58:30,677 INFO : 85% Done

27 Feb 2021 10:58:30,716 DEBUG: Total molecules inserted: 30

27 Feb 2021 10:58:30,717 INFO : Inserting PG (Phosphatidylglycerol)

27 Feb 2021 10:58:30,724 INFO : 86% Done

27 Feb 2021 10:58:30,773 DEBUG: Total molecules inserted: 3

27 Feb 2021 10:58:30,778 INFO : 87% Done

27 Feb 2021 10:58:30,779 INFO : Inserting PI (Phosphatidylinositol)

27 Feb 2021 10:58:30,863 INFO : 88% Done

27 Feb 2021 10:58:30,905 INFO : 89% Done

27 Feb 2021 10:58:30,948 INFO : 90% Done

27 Feb 2021 10:58:31,022 INFO : 91% Done

27 Feb 2021 10:58:31,074 INFO : 92% Done

27 Feb 2021 10:58:31,125 INFO : 93% Done

27 Feb 2021 10:58:31,181 DEBUG: Total molecules inserted: 19

27 Feb 2021 10:58:31,182 INFO : Inserting SM (Sphingomyelin)

27 Feb 2021 10:58:31,220 INFO : 94% Done

27 Feb 2021 10:58:31,261 INFO : 95% Done

27 Feb 2021 10:58:31,304 INFO : 96% Done

27 Feb 2021 10:58:31,397 INFO : 97% Done

27 Feb 2021 10:58:31,438 INFO : 98% Done

27 Feb 2021 10:58:31,496 DEBUG: Total molecules inserted: 16

27 Feb 2021 10:58:31,499 INFO : Done parsing Skyline document.

27 Feb 2021 10:58:31,527 INFO : Creating and populating temp tables for Proportion values

27 Feb 2021 10:58:31,544 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo

27 Feb 2021 10:58:31,548 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo

27 Feb 2021 10:58:31,551 INFO : Cleaning up temp tables

27 Feb 2021 10:58:31,555 INFO : Completed import of Skyline document from 2_Plasma_Lipid_Library_Negative.sky.zip

27 Feb 2021 10:58:31,562 INFO : 100% Done

27 Feb 2021 10:58:31,635 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'