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Skyline document import - 050124_CortexMatrixSelectivityTesting_2025-04-10_15-56-24.sky.zip

Sensitivity-Background Matrix tests

Job Status

Created: 2025-04-10 12:56:35
Modified: 2025-04-10 12:56:48
Email: hanseka@iu.edu
Status: COMPLETE
Info:
Description: Skyline document import - 050124_CortexMatrixSelectivityTesting_2025-04-10_15-56-24.sky.zip
File Path: /data/labkey/files/Indiana U - Proteome Analysis/Reproducability and repeatability Aducanumab Assay/Sensitivity-Background Matrix tests/@files/050124_CortexMatrixSelectivityTesting_2025-04-10_15-56-24.sky_2025-04-10_12-56-34.log
Files: 050124_CortexMatrixSelectivityTesting_2025-04-10_15-56-24.sky_2025-04-10_12-56-34.log
Completed Runs: 050124_CortexMatrixSelectivityTesting_2025-04-10_15-56-24.sky.zip
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Log File


10 Apr 2025 12:56:46,397 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
10 Apr 2025 12:56:46,398 INFO : Starting to import Skyline document from 050124_CortexMatrixSelectivityTesting_2025-04-10_15-56-24.sky.zip
10 Apr 2025 12:56:46,398 INFO : Expanding 050124_CortexMatrixSelectivityTesting.skyd
10 Apr 2025 12:56:46,451 INFO : Expanding 050124_CortexMatrixSelectivityTesting.sky.view
10 Apr 2025 12:56:46,452 INFO : Expanding 050124_CortexMatrixSelectivityTesting.sky
10 Apr 2025 12:56:46,457 INFO : Expanding 050124_CortexMatrixSelectivityTesting.skyl
10 Apr 2025 12:56:46,460 INFO : Reading Skyline file, 050124_CortexMatrixSelectivityTesting.sky, to determine if the TransitionChromInfos in the document should be stored...
10 Apr 2025 12:56:46,466 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
10 Apr 2025 12:56:46,467 WARN : The version of this Skyline document is 24.1. This is newer than the highest supported version 23.1
10 Apr 2025 12:56:46,468 INFO : 4% Done
10 Apr 2025 12:56:46,504 WARN : Duplicate entries found for file path D:\Aducanumab project\05_01_24_assaymapcurveCortexMatrixtests\2024_05_01_assaymapCORTEXA.raw, may not resolve sample file-scoped chromatograms correctly
10 Apr 2025 12:56:46,504 WARN : Duplicate entries found for file path D:\Aducanumab project\05_01_24_assaymapcurveCortexMatrixtests\2024_05_01_assaymapCORTEXB.raw, may not resolve sample file-scoped chromatograms correctly
10 Apr 2025 12:56:46,505 WARN : Duplicate entries found for file path D:\Aducanumab project\05_01_24_assaymapcurveCortexMatrixtests\2024_05_01_assaymapCORTEXC.raw, may not resolve sample file-scoped chromatograms correctly
10 Apr 2025 12:56:46,663 INFO : Inserting Aducanumab chimeric
10 Apr 2025 12:56:46,671 INFO : 24% Done
10 Apr 2025 12:56:46,816 INFO : 42% Done
10 Apr 2025 12:56:46,946 INFO : 60% Done
10 Apr 2025 12:56:47,078 INFO : 80% Done
10 Apr 2025 12:56:47,213 INFO : Done parsing Skyline document.
10 Apr 2025 12:56:47,266 INFO : No group comparisons found.
10 Apr 2025 12:56:47,266 INFO : Calculating calibration curves
10 Apr 2025 12:56:47,343 INFO : 98% Done
10 Apr 2025 12:56:47,365 INFO : Done calculating calibration curves.
10 Apr 2025 12:56:47,833 INFO : Creating and populating temp tables for Proportion values
10 Apr 2025 12:56:47,837 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
10 Apr 2025 12:56:47,849 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
10 Apr 2025 12:56:47,854 INFO : Cleaning up temp tables
10 Apr 2025 12:56:48,071 INFO : Completed import of Skyline document from 050124_CortexMatrixSelectivityTesting_2025-04-10_15-56-24.sky.zip
10 Apr 2025 12:56:48,073 INFO : 100% Done
10 Apr 2025 12:56:48,265 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'