• Sign In
  1. Pipeline Jobs

Validating data for experiment Id: 1728, validation Id: 685

MLU Sinz Lab - XL-MS with MeroX and Skyline

Job Status

Created: 2023-11-27 22:30:14
Modified: 2023-11-27 22:30:16
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Validating data for experiment Id: 1728, validation Id: 685
File Path: /data/labkey/files/Panorama Public/2023/MLU Sinz Lab - XL-MS with MeroX and Skyline/@files/Experiment_Validation_1816_2023-11-27_22-30-13.log
Files: Experiment_Validation_1816_2023-11-27_22-30-13.log
Show Grid Data Browse Files

Log File


27 Nov 2023 22:30:14,621 INFO : Validating data for a ProteomeXchange submission.
27 Nov 2023 22:30:14,623 INFO : =======================================
27 Nov 2023 22:30:14,663 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask' at location 'webserver'
27 Nov 2023 22:30:14,664 INFO : Validating data for experiment Id: 1728, validation Id: 685
27 Nov 2023 22:30:14,690 INFO : Validating data for 4 Skyline documents in 1 folders
27 Nov 2023 22:30:15,474 INFO : Sample file validation for Skyline document: MeroX_BSA-DSBU_S-Trap_2023-07-25_11-20-21.sky.zip
27 Nov 2023 22:30:15,474 INFO :   Found all sample files.
27 Nov 2023 22:30:15,496 INFO : Sample file validation for Skyline document: MeroX_BSA-DSBU_S-Trap_Refined_2023-07-31_18-08-11.sky.zip
27 Nov 2023 22:30:15,496 INFO :   Found all sample files.
27 Nov 2023 22:30:15,516 INFO : Sample file validation for Skyline document: MeroX_BSA-DSBU_S-Trap_Final_2023-09-07_16-28-27.sky.zip
27 Nov 2023 22:30:15,516 INFO :   Found all sample files.
27 Nov 2023 22:30:15,575 INFO : Sample file validation for Skyline document: MeroX_BSA-DSBU_S-Trap_DIA-PASEF_2023-11-16_01-18-04.sky.zip
27 Nov 2023 22:30:15,575 INFO :   Found all sample files.
27 Nov 2023 22:30:15,605 INFO : Modifications validation:
27 Nov 2023 22:30:15,605 INFO : VALID MODIFICATIONS:
27 Nov 2023 22:30:15,606 INFO : 5407: Carbamidomethyl (C): UNIMOD:4 - Carbamidomethyl
27 Nov 2023 22:30:15,606 INFO :     MeroX_BSA-DSBU_S-Trap_Final_2023-09-07_16-28-27.sky.zip
27 Nov 2023 22:30:15,606 INFO :     MeroX_BSA-DSBU_S-Trap_DIA-PASEF_2023-11-16_01-18-04.sky.zip
27 Nov 2023 22:30:15,606 INFO :     MeroX_BSA-DSBU_S-Trap_2023-07-25_11-20-21.sky.zip
27 Nov 2023 22:30:15,606 INFO :     MeroX_BSA-DSBU_S-Trap_Refined_2023-07-31_18-08-11.sky.zip
27 Nov 2023 22:30:15,606 INFO : 5408: Label:13C(6)15N(2) (C-term K): 
27 Nov 2023 22:30:15,606 INFO :     MeroX_BSA-DSBU_S-Trap_Final_2023-09-07_16-28-27.sky.zip
27 Nov 2023 22:30:15,606 INFO :     MeroX_BSA-DSBU_S-Trap_DIA-PASEF_2023-11-16_01-18-04.sky.zip
27 Nov 2023 22:30:15,606 INFO :     MeroX_BSA-DSBU_S-Trap_Refined_2023-07-31_18-08-11.sky.zip
27 Nov 2023 22:30:15,606 INFO : 5409: Label:13C(6)15N(4) (C-term R): 
27 Nov 2023 22:30:15,606 INFO :     MeroX_BSA-DSBU_S-Trap_Final_2023-09-07_16-28-27.sky.zip
27 Nov 2023 22:30:15,606 INFO :     MeroX_BSA-DSBU_S-Trap_DIA-PASEF_2023-11-16_01-18-04.sky.zip
27 Nov 2023 22:30:15,606 INFO :     MeroX_BSA-DSBU_S-Trap_Refined_2023-07-31_18-08-11.sky.zip
27 Nov 2023 22:30:15,606 INFO : INVALID MODIFICATIONS (No Unimod ID):
27 Nov 2023 22:30:15,606 INFO : 5405: DSBU (dead-end water): No UNIMOD Id
27 Nov 2023 22:30:15,606 INFO :     MeroX_BSA-DSBU_S-Trap_Final_2023-09-07_16-28-27.sky.zip
27 Nov 2023 22:30:15,606 INFO :     MeroX_BSA-DSBU_S-Trap_DIA-PASEF_2023-11-16_01-18-04.sky.zip
27 Nov 2023 22:30:15,606 INFO :     MeroX_BSA-DSBU_S-Trap_2023-07-25_11-20-21.sky.zip
27 Nov 2023 22:30:15,606 INFO :     MeroX_BSA-DSBU_S-Trap_Refined_2023-07-31_18-08-11.sky.zip
27 Nov 2023 22:30:15,606 INFO : 5406: DSBU (XL): No UNIMOD Id
27 Nov 2023 22:30:15,606 INFO :     MeroX_BSA-DSBU_S-Trap_Final_2023-09-07_16-28-27.sky.zip
27 Nov 2023 22:30:15,606 INFO :     MeroX_BSA-DSBU_S-Trap_DIA-PASEF_2023-11-16_01-18-04.sky.zip
27 Nov 2023 22:30:15,606 INFO :     MeroX_BSA-DSBU_S-Trap_2023-07-25_11-20-21.sky.zip
27 Nov 2023 22:30:15,606 INFO :     MeroX_BSA-DSBU_S-Trap_Refined_2023-07-31_18-08-11.sky.zip
27 Nov 2023 22:30:15,608 INFO : Validating spectral library: MeroX_BSA_DSBU_S_Trap_HighCE_q_0_05.blib
27 Nov 2023 22:30:15,678 INFO : 'MeroX_BSA-DSBU_S-Trap_HighCE_q_0.05' (MeroX_BSA_DSBU_S_Trap_HighCE_q_0_05.blib) library in 1 Skyline documents was built with 4 raw files; 4 peptide Id files. Status: VALID
27 Nov 2023 22:30:15,679 INFO : Validating spectral library: MeroX_BSA_DSBU_S_Trap_q_0_05.blib
27 Nov 2023 22:30:15,974 INFO : 'MeroX_BSA-DSBU_S-Trap_q_0.05' (MeroX_BSA_DSBU_S_Trap_q_0_05.blib) library in 4 Skyline documents was built with 10 raw files; 10 peptide Id files. Status: VALID
27 Nov 2023 22:30:15,976 INFO : Validating spectral library: MeroX_BSA_DSBU_S_Trap_LowCE_q_0_05.blib
27 Nov 2023 22:30:16,044 INFO : 'MeroX_BSA-DSBU_S-Trap_LowCE_q_0.05' (MeroX_BSA_DSBU_S_Trap_LowCE_q_0_05.blib) library in 1 Skyline documents was built with 5 raw files; 5 peptide Id files. Status: VALID
27 Nov 2023 22:30:16,045 INFO : Validating spectral library: MeroX_BSA_DSBU_S_Trap_MidCE_q_0_05.blib
27 Nov 2023 22:30:16,098 INFO : 'MeroX_BSA-DSBU_S-Trap_MidCE_q_0.05' (MeroX_BSA_DSBU_S_Trap_MidCE_q_0_05.blib) library in 1 Skyline documents was built with 1 raw files; 1 peptide Id files. Status: VALID
27 Nov 2023 22:30:16,098 INFO : Spectral library validation complete.
27 Nov 2023 22:30:16,099 INFO : Data validation is complete. Status is IncompleteMetadata
27 Nov 2023 22:30:16,099 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask'