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Validating data for experiment Id: 1592, validation Id: 381

Moffitt Cancer Center Koomen Lab - LSCC_Proteogenomics_Cohort_LC-MRM

Job Status

Created: 2023-03-07 23:40:00
Modified: 2023-03-07 23:40:00
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Validating data for experiment Id: 1592, validation Id: 381
File Path: /data/labkey/files/Panorama Public/2023/Moffitt Cancer Center Koomen Lab - LSCC_Proteogenomics_Cohort_LC-MRM/@files/Experiment_Validation_1672_2023-03-07_23-39-59.log
Files: Experiment_Validation_1672_2023-03-07_23-39-59.log
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Log File


07 Mar 2023 23:40:00,342 INFO : Validating data for a ProteomeXchange submission.
07 Mar 2023 23:40:00,343 INFO : =======================================
07 Mar 2023 23:40:00,410 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask' at location 'webserver'
07 Mar 2023 23:40:00,412 INFO : Validating data for experiment Id: 1592, validation Id: 381
07 Mar 2023 23:40:00,439 INFO : Validating data for 1 Skyline documents in 1 folders
07 Mar 2023 23:40:00,577 INFO : Sample file validation for Skyline document: 10-11-2021_LSCC_MRMassay_SCC-ID_NC-CALL_2023-03-06_13-41-03.sky.zip
07 Mar 2023 23:40:00,577 INFO :   Found all sample files.
07 Mar 2023 23:40:00,605 INFO : Modifications validation:
07 Mar 2023 23:40:00,605 INFO : VALID MODIFICATIONS:
07 Mar 2023 23:40:00,605 INFO : 4113: Carbamidomethyl Cysteine: 
07 Mar 2023 23:40:00,605 INFO :     10-11-2021_LSCC_MRMassay_SCC-ID_NC-CALL_2023-03-06_13-41-03.sky.zip
07 Mar 2023 23:40:00,605 INFO : 4114: Carbamidomethyl (C): UNIMOD:4 - Carbamidomethyl
07 Mar 2023 23:40:00,605 INFO :     10-11-2021_LSCC_MRMassay_SCC-ID_NC-CALL_2023-03-06_13-41-03.sky.zip
07 Mar 2023 23:40:00,605 INFO : 4115: oxidation: 
07 Mar 2023 23:40:00,605 INFO :     10-11-2021_LSCC_MRMassay_SCC-ID_NC-CALL_2023-03-06_13-41-03.sky.zip
07 Mar 2023 23:40:00,605 INFO : 4116: Label:13C(6)15N(2) (C-term K): 
07 Mar 2023 23:40:00,605 INFO :     10-11-2021_LSCC_MRMassay_SCC-ID_NC-CALL_2023-03-06_13-41-03.sky.zip
07 Mar 2023 23:40:00,605 INFO : 4117: Label:13C(6)15N(4) (C-term R): 
07 Mar 2023 23:40:00,605 INFO :     10-11-2021_LSCC_MRMassay_SCC-ID_NC-CALL_2023-03-06_13-41-03.sky.zip
07 Mar 2023 23:40:00,605 INFO : 4118: Heavy K: 
07 Mar 2023 23:40:00,605 INFO :     10-11-2021_LSCC_MRMassay_SCC-ID_NC-CALL_2023-03-06_13-41-03.sky.zip
07 Mar 2023 23:40:00,605 INFO : 4119: Heavy R: 
07 Mar 2023 23:40:00,605 INFO :     10-11-2021_LSCC_MRMassay_SCC-ID_NC-CALL_2023-03-06_13-41-03.sky.zip
07 Mar 2023 23:40:00,605 INFO : INVALID MODIFICATIONS (No Unimod ID):
07 Mar 2023 23:40:00,607 INFO : Validating spectral library: human_hcd_tryp_best.blib
07 Mar 2023 23:40:00,612 INFO : 'Human (10-11-2021_LSCC_MRMassay_SCC-ID_NC-CALL)' (human_hcd_tryp_best.blib) library in 1 Skyline documents was built with 0 raw files; 0 peptide Id files. Status: Missing spectrum and peptide ID file names in the .blib file.
07 Mar 2023 23:40:00,612 INFO : Spectral library validation complete.
07 Mar 2023 23:40:00,612 INFO : Data validation is complete. Status is Complete
07 Mar 2023 23:40:00,612 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask'