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Validating data for experiment Id: 1428, validation Id: 21

QIMRBerghofer - LeMBA serum biomarkers for Ovarian Cancer

Job Status

Created: 2022-05-31 11:20:06
Modified: 2022-05-31 11:20:17
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Validating data for experiment Id: 1428, validation Id: 21
File Path: /data/labkey/files/Panorama Public/2022/QIMRBerghofer - LeMBA serum biomarkers for Ovarian Cancer/@files/Experiment_Validation_1506_2022-05-31_11-20-05.log
Files: Experiment_Validation_1506_2022-05-31_11-20-05.log
Show Grid Data Browse Files

Log File


31 May 2022 11:20:06,859 INFO : Validating data for a ProteomeXchange submission.
31 May 2022 11:20:06,860 INFO : =======================================
31 May 2022 11:20:07,017 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask' at location 'webserver'
31 May 2022 11:20:07,018 INFO : Validating data for experiment Id: 1428, validation Id: 21
31 May 2022 11:20:07,130 INFO : Validating data for 3 Skyline documents in 1 folders
31 May 2022 11:20:10,744 INFO : Sample file validation for Skyline document: OvCa_AOCS_FINAL_AAL_2022-04-01_21-34-15.sky.zip
31 May 2022 11:20:10,744 INFO :   Found all sample files.
31 May 2022 11:20:14,296 INFO : Sample file validation for Skyline document: OvCa_AOCS_FINAL_STL_2022-04-01_21-38-18.sky.zip
31 May 2022 11:20:14,296 INFO :   Found all sample files.
31 May 2022 11:20:17,689 INFO : Sample file validation for Skyline document: OvCa_AOCS_FINAL_SNA_2022-04-01_21-41-56.sky.zip
31 May 2022 11:20:17,689 INFO :   Found all sample files.
31 May 2022 11:20:17,790 INFO : Modifications validation:
31 May 2022 11:20:17,790 INFO : VALID MODIFICATIONS:
31 May 2022 11:20:17,790 INFO : 37: Carbamidomethyl (C): UNIMOD:4 - Carbamidomethyl
31 May 2022 11:20:17,790 INFO :     OvCa_AOCS_FINAL_AAL_2022-04-01_21-34-15.sky.zip
31 May 2022 11:20:17,790 INFO :     OvCa_AOCS_FINAL_STL_2022-04-01_21-38-18.sky.zip
31 May 2022 11:20:17,790 INFO :     OvCa_AOCS_FINAL_SNA_2022-04-01_21-41-56.sky.zip
31 May 2022 11:20:17,790 INFO : 38: Label:13C(6)15N(2) (C-term K): 
31 May 2022 11:20:17,790 INFO :     OvCa_AOCS_FINAL_AAL_2022-04-01_21-34-15.sky.zip
31 May 2022 11:20:17,790 INFO :     OvCa_AOCS_FINAL_STL_2022-04-01_21-38-18.sky.zip
31 May 2022 11:20:17,790 INFO :     OvCa_AOCS_FINAL_SNA_2022-04-01_21-41-56.sky.zip
31 May 2022 11:20:17,790 INFO : 39: Label:13C(6)15N(4) (C-term R): 
31 May 2022 11:20:17,790 INFO :     OvCa_AOCS_FINAL_AAL_2022-04-01_21-34-15.sky.zip
31 May 2022 11:20:17,790 INFO :     OvCa_AOCS_FINAL_STL_2022-04-01_21-38-18.sky.zip
31 May 2022 11:20:17,790 INFO :     OvCa_AOCS_FINAL_SNA_2022-04-01_21-41-56.sky.zip
31 May 2022 11:20:17,791 INFO : 40: Label:13C(5)15N(1) (V): UNIMOD:268 - Label:13C(5)15N(1)
31 May 2022 11:20:17,791 INFO :     OvCa_AOCS_FINAL_AAL_2022-04-01_21-34-15.sky.zip
31 May 2022 11:20:17,791 INFO :     OvCa_AOCS_FINAL_STL_2022-04-01_21-38-18.sky.zip
31 May 2022 11:20:17,791 INFO :     OvCa_AOCS_FINAL_SNA_2022-04-01_21-41-56.sky.zip
31 May 2022 11:20:17,791 INFO : INVALID MODIFICATIONS (No Unimod ID):
31 May 2022 11:20:17,843 INFO : Spectral library validation:
31 May 2022 11:20:17,843 INFO : 'msms_WFA_TOCS' (msms_WFA_TOCS.blib) library in 3 Skyline documents was built with 0 raw files; 0 peptide Id files. Status: Library file is missing from the Skyline document ZIP file.
31 May 2022 11:20:17,843 INFO : 'msms_AAL_TOCS' (msms_AAL_TOCS.blib) library in 3 Skyline documents was built with 0 raw files; 0 peptide Id files. Status: Library file is missing from the Skyline document ZIP file.
31 May 2022 11:20:17,843 INFO : 'msms_WFA_OPS' (msms_WFA_OPS.blib) library in 3 Skyline documents was built with 0 raw files; 0 peptide Id files. Status: Library file is missing from the Skyline document ZIP file.
31 May 2022 11:20:17,843 INFO : 'msms_STL_OPS' (msms_STL_OPS.blib) library in 3 Skyline documents was built with 0 raw files; 0 peptide Id files. Status: Library file is missing from the Skyline document ZIP file.
31 May 2022 11:20:17,843 INFO : 'msms_AAL_OPS' (msms_AAL_OPS.blib) library in 3 Skyline documents was built with 0 raw files; 0 peptide Id files. Status: Library file is missing from the Skyline document ZIP file.
31 May 2022 11:20:17,843 INFO : 'msms_LPHA_OPS' (msms_LPHA_OPS.blib) library in 3 Skyline documents was built with 0 raw files; 0 peptide Id files. Status: Library file is missing from the Skyline document ZIP file.
31 May 2022 11:20:17,843 INFO : 'msms_STL_TOCS' (msms_STL_TOCS.blib) library in 3 Skyline documents was built with 0 raw files; 0 peptide Id files. Status: Library file is missing from the Skyline document ZIP file.
31 May 2022 11:20:17,844 INFO : 'msms_ECA_TOCS' (msms_ECA_TOCS.blib) library in 3 Skyline documents was built with 0 raw files; 0 peptide Id files. Status: Library file is missing from the Skyline document ZIP file.
31 May 2022 11:20:17,844 INFO : 'msms_SNA_TOCS' (msms_SNA_TOCS.blib) library in 3 Skyline documents was built with 0 raw files; 0 peptide Id files. Status: Library file is missing from the Skyline document ZIP file.
31 May 2022 11:20:17,844 INFO : 'msms_ECA_OPS' (msms_ECA_OPS.blib) library in 3 Skyline documents was built with 0 raw files; 0 peptide Id files. Status: Library file is missing from the Skyline document ZIP file.
31 May 2022 11:20:17,844 INFO : 'msms_LPHA_TOCS' (msms_LPHA_TOCS.blib) library in 3 Skyline documents was built with 0 raw files; 0 peptide Id files. Status: Library file is missing from the Skyline document ZIP file.
31 May 2022 11:20:17,844 INFO : 'msms_SNA_OPS' (msms_SNA_OPS.blib) library in 3 Skyline documents was built with 0 raw files; 0 peptide Id files. Status: Library file is missing from the Skyline document ZIP file.
31 May 2022 11:20:17,845 INFO : Data validation is complete. Status is NotValid
31 May 2022 11:20:17,845 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask'