01 Sep 2023 15:25:56,564 INFO : Copying experiment "Assessing Per- and Polyfluoroalkyl Substances (PFAS) in Fish Fillet Using Non-Targeted Analyses" from folder /UNC - Baker Lab/2023 NC Fish PFAS to /Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS
01 Sep 2023 15:25:56,564 INFO : =======================================
01 Sep 2023 15:25:56,582 DEBUG: Resetting Job ID: 3deaf5b1-2b44-103c-a32e-fea6ddf5643a
01 Sep 2023 15:26:37,104 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask' at location 'webserver-high-priority'
01 Sep 2023 15:26:37,104 INFO :
01 Sep 2023 15:26:37,104 INFO : Exporting experiment.
01 Sep 2023 15:26:40,357 INFO : Exporting files metadata.
01 Sep 2023 15:26:40,357 DEBUG: [/UNC - Baker Lab/2023 NC Fish PFAS] Writing files metadata to /data/labkey/files/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS/@files/export
01 Sep 2023 15:26:40,360 INFO :
01 Sep 2023 15:26:40,360 INFO : Experiment export completed successfully.
01 Sep 2023 15:26:40,360 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask'
01 Sep 2023 15:26:40,385 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask' at location 'webserver-high-priority'
01 Sep 2023 15:26:40,385 INFO :
01 Sep 2023 15:26:40,385 INFO : Importing experiment.
01 Sep 2023 15:26:40,393 DEBUG: [/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS] Importing folder properties from: /data/labkey/files/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS/@files/export
01 Sep 2023 15:26:40,394 INFO : Loading folder properties (folder type, settings and active modules)
01 Sep 2023 15:26:40,394 DEBUG: [/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS] Folder type: Targeted MS
01 Sep 2023 15:26:40,394 DEBUG: [/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS] Active modules: Assay, Core, MS2, Announcements, FileContent, Issues, Search, Experiment, PanoramaPublic, API, Wiki, TargetedMS, Pipeline, Query
01 Sep 2023 15:26:40,458 INFO : Done importing folder properties (folder type, settings and active modules)
01 Sep 2023 15:26:40,459 INFO : Loading container specific module properties
01 Sep 2023 15:26:40,462 INFO : Done importing container specific module properties
01 Sep 2023 15:26:40,464 INFO : Loading etl definitions
01 Sep 2023 15:26:40,465 INFO : Loading wikis
01 Sep 2023 15:26:40,466 INFO : 0 wikis imported
01 Sep 2023 15:26:40,466 INFO : Done importing wikis
01 Sep 2023 15:26:40,877 INFO : Starting Data Class Importer
01 Sep 2023 15:26:40,878 INFO : No types XAR file to process.
01 Sep 2023 15:26:40,878 INFO : Finished Data Class Importer
01 Sep 2023 15:26:41,108 INFO : Starting to copy files
01 Sep 2023 15:26:41,109 INFO : Copied 0 files
01 Sep 2023 15:26:41,109 INFO : Ensuring exp.data rows exist for imported files
01 Sep 2023 15:26:41,220 INFO : Starting Sample Type Importer
01 Sep 2023 15:26:41,220 INFO : No types XAR file to process.
01 Sep 2023 15:26:41,220 INFO : Finished Sample Type Importer
01 Sep 2023 15:26:41,221 INFO : Loading xar
01 Sep 2023 15:26:42,099 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-12066:TargetedMS.ImportSkyZip'
01 Sep 2023 15:26:42,101 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-12066:TargetedMS.ImportSkyZip.Core'
01 Sep 2023 15:26:42,102 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-12066:TargetedMS.ImportSkyZip.Output'
01 Sep 2023 15:26:42,102 DEBUG: Protocol import complete
01 Sep 2023 15:26:42,104 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-12066:Assessing+Per-+and+Polyfluoroalkyl+Substances+%28PFAS%29+in+Fish+Fillet+Using+Non-Targeted+Analyses'
01 Sep 2023 15:26:42,104 DEBUG: Experiment/Run group import complete
01 Sep 2023 15:26:42,112 DEBUG: Protocol action set import complete
01 Sep 2023 15:26:42,120 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-12066:TargetedMS.ImportSkyZip'
01 Sep 2023 15:26:42,125 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-12066:2e3739d8-2b0c-103c-a32e-fea6ddf5643a'
01 Sep 2023 15:26:42,129 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-12066:2e37395d-2b0c-103c-a32e-fea6ddf5643a'
01 Sep 2023 15:26:42,129 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-12066:TargetedMS.ImportSkyZip.Core'
01 Sep 2023 15:26:42,131 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-12066:TargetedMS.ImportSkyZip.Output'
01 Sep 2023 15:26:42,132 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-12066:2e373c27-2b0c-103c-a32e-fea6ddf5643a'
01 Sep 2023 15:26:42,133 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2023/UNC%20Baker%20Lab%20-%202023%20NC%20Fish%20PFAS/@files/export/xar/experiments_and_runs.xar.exploded/Run168935/Fish-PFAS_2023-09-01_2023-09-01_11-42-44/Fish-PFAS_2023-09-01.skyd into the system
01 Sep 2023 15:26:42,133 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2023/UNC%20Baker%20Lab%20-%202023%20NC%20Fish%20PFAS/@files/export/xar/experiments_and_runs.xar.exploded/Run168935/Fish-PFAS_2023-09-01_2023-09-01_11-42-44/Fish-PFAS_2023-09-01.skyd into the system
01 Sep 2023 15:26:42,134 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2023/UNC%20Baker%20Lab%20-%202023%20NC%20Fish%20PFAS/@files/export/xar/experiments_and_runs.xar.exploded/Run168935/Fish-PFAS_2023-09-01_2023-09-01_11-42-44.sky.zip into the system
01 Sep 2023 15:26:42,134 INFO : Starting import from Fish-PFAS_2023-09-01_2023-09-01_11-42-44.sky.zip
01 Sep 2023 15:26:42,137 INFO : Starting to import Skyline document from Fish-PFAS_2023-09-01_2023-09-01_11-42-44.sky.zip
01 Sep 2023 15:26:42,343 INFO : Expanding Fish-PFAS_2023-09-01.skyd
01 Sep 2023 15:26:42,854 INFO : Expanding Fish-PFAS_2023-09-01.sky.view
01 Sep 2023 15:26:42,855 INFO : Expanding Fish-PFAS_2023-09-01.sky
01 Sep 2023 15:26:42,870 INFO : Expanding Fish-PFAS_2023-09-01.skyl
01 Sep 2023 15:26:42,957 WARN : The version of this Skyline document is 22.2. This is newer than the highest supported version 22.13
01 Sep 2023 15:26:42,964 INFO : 1% Done
01 Sep 2023 15:26:43,204 DEBUG: Starting to load chromatogram headers
01 Sep 2023 15:26:43,228 DEBUG: Done loading chromatogram headers
01 Sep 2023 15:26:43,444 INFO : Inserting MPFAC-HIF-ES
01 Sep 2023 15:26:43,450 INFO : 3% Done
01 Sep 2023 15:26:43,496 INFO : 5% Done
01 Sep 2023 15:26:43,543 INFO : 6% Done
01 Sep 2023 15:26:43,591 INFO : 8% Done
01 Sep 2023 15:26:43,631 INFO : 10% Done
01 Sep 2023 15:26:43,671 INFO : 12% Done
01 Sep 2023 15:26:43,711 INFO : 14% Done
01 Sep 2023 15:26:43,753 INFO : 16% Done
01 Sep 2023 15:26:43,796 INFO : 17% Done
01 Sep 2023 15:26:43,842 INFO : 19% Done
01 Sep 2023 15:26:43,888 INFO : 21% Done
01 Sep 2023 15:26:43,933 INFO : 23% Done
01 Sep 2023 15:26:43,979 INFO : 25% Done
01 Sep 2023 15:26:44,025 INFO : 26% Done
01 Sep 2023 15:26:44,069 INFO : 27% Done
01 Sep 2023 15:26:44,112 INFO : 29% Done
01 Sep 2023 15:26:44,161 INFO : 30% Done
01 Sep 2023 15:26:44,203 INFO : 31% Done
01 Sep 2023 15:26:44,263 INFO : 33% Done
01 Sep 2023 15:26:44,319 INFO : 35% Done
01 Sep 2023 15:26:44,363 INFO : 37% Done
01 Sep 2023 15:26:44,408 INFO : 39% Done
01 Sep 2023 15:26:44,451 INFO : 41% Done
01 Sep 2023 15:26:44,504 INFO : 42% Done
01 Sep 2023 15:26:44,545 DEBUG: Total molecules inserted: 24
01 Sep 2023 15:26:44,545 INFO : Inserting June2023
01 Sep 2023 15:26:44,551 INFO : 44% Done
01 Sep 2023 15:26:44,599 INFO : 45% Done
01 Sep 2023 15:26:44,638 DEBUG: Total molecules inserted: 2
01 Sep 2023 15:26:44,638 INFO : Inserting PFCA
01 Sep 2023 15:26:44,644 INFO : 46% Done
01 Sep 2023 15:26:44,691 INFO : 48% Done
01 Sep 2023 15:26:44,741 INFO : 50% Done
01 Sep 2023 15:26:44,792 INFO : 52% Done
01 Sep 2023 15:26:44,835 INFO : 53% Done
01 Sep 2023 15:26:44,882 INFO : 57% Done
01 Sep 2023 15:26:44,958 INFO : 60% Done
01 Sep 2023 15:26:45,036 INFO : 63% Done
01 Sep 2023 15:26:45,116 INFO : 66% Done
01 Sep 2023 15:26:45,188 DEBUG: Total molecules inserted: 9
01 Sep 2023 15:26:45,188 INFO : Inserting PFSA
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1001-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1002-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1003-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1005-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1006-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1007-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1008-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1009-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1011-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1012-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1013-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1015-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1018-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1020-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1023-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1025-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1026-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1029-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1030-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1032-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1033-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1035-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1039-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1040-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1041-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1042-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1043-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1044-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1045-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1046-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1047-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1048-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1049-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1050-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1052-02.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1053-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1055-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1057-01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1004_01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1010_01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1016-1_01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1019_01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1031_01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1034_01.d.DeMP.d
01 Sep 2023 15:26:45,191 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1037-1_01.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1038-1_01.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\1051_01.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\MB01-01.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\MB02-01.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\MB03_01.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\BB01_01.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\DB-01.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\DB-02.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\DB-03.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\DB-04.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\DB-05.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\DB_02.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\DB_03.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\DB_04.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\DB_05.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\DB_06.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\SIL-01.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\SIL-02.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\SIL-03.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\SIL-04.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\SIL-05.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\SIL-06.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\SIL-07.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\SIL-08.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\SIL-09.d.m.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\SIL_02.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\SIL_03.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\SIL_04.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\SIL_05.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\SIL_06.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\SIL_07.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\SIL_08.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\SIL_09.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC01-01.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC01-02.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC01-03.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC01-04.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC01-05.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC02_01.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC02_02.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC02_03.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC02_04.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC02-01.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC02-02.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC02-03.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC02-04.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC02-05.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC02-06.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC03_01.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC03_02.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC03_03.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC03_04.d.DeMP.d
01 Sep 2023 15:26:45,192 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC03_05.d.DeMP.d
01 Sep 2023 15:26:45,193 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC03_06.d.DeMP.d
01 Sep 2023 15:26:45,193 WARN : Unable to find at least one chromatogram for file path D:\2022 05 and 06 sunfish\QC04_01.d.DeMP.d
01 Sep 2023 15:26:45,194 INFO : 68% Done
01 Sep 2023 15:26:45,213 INFO : 70% Done
01 Sep 2023 15:26:45,261 INFO : 71% Done
01 Sep 2023 15:26:45,311 INFO : 73% Done
01 Sep 2023 15:26:45,352 INFO : 74% Done
01 Sep 2023 15:26:45,394 INFO : 76% Done
01 Sep 2023 15:26:45,439 INFO : 77% Done
01 Sep 2023 15:26:45,485 INFO : 79% Done
01 Sep 2023 15:26:45,528 INFO : 81% Done
01 Sep 2023 15:26:45,568 INFO : 83% Done
01 Sep 2023 15:26:45,586 INFO : 84% Done
01 Sep 2023 15:26:45,627 DEBUG: Total molecules inserted: 11
01 Sep 2023 15:26:45,627 INFO : Inserting FT
01 Sep 2023 15:26:45,633 INFO : 86% Done
01 Sep 2023 15:26:45,668 DEBUG: Total molecules inserted: 1
01 Sep 2023 15:26:45,668 INFO : Inserting PFP
01 Sep 2023 15:26:45,673 INFO : 88% Done
01 Sep 2023 15:26:45,720 INFO : 89% Done
01 Sep 2023 15:26:45,766 INFO : 91% Done
01 Sep 2023 15:26:45,813 INFO : 93% Done
01 Sep 2023 15:26:45,852 DEBUG: Total molecules inserted: 4
01 Sep 2023 15:26:45,852 INFO : Inserting PFASA
01 Sep 2023 15:26:45,860 INFO : 95% Done
01 Sep 2023 15:26:45,919 INFO : 96% Done
01 Sep 2023 15:26:45,968 INFO : 98% Done
01 Sep 2023 15:26:46,004 DEBUG: Total molecules inserted: 3
01 Sep 2023 15:26:46,006 INFO : Done parsing Skyline document.
01 Sep 2023 15:26:46,374 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\SIL-05.d.DeMP.d
01 Sep 2023 15:26:46,374 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1033-01.d.DeMP.d
01 Sep 2023 15:26:46,374 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1032-01.d.DeMP.d
01 Sep 2023 15:26:46,374 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1030-01.d.DeMP.d
01 Sep 2023 15:26:46,374 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1039-01.d.DeMP.d
01 Sep 2023 15:26:46,374 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\SIL_04.d.DeMP.d
01 Sep 2023 15:26:46,374 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC01-01.d.DeMP.d
01 Sep 2023 15:26:46,374 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC03_06.d.DeMP.d
01 Sep 2023 15:26:46,374 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\DB_04.d.DeMP.d
01 Sep 2023 15:26:46,374 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC02-01.d.DeMP.d
01 Sep 2023 15:26:46,374 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1035-01.d.DeMP.d
01 Sep 2023 15:26:46,374 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC02-06.d.DeMP.d
01 Sep 2023 15:26:46,374 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1016-1_01.d.DeMP.d
01 Sep 2023 15:26:46,374 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\SIL_05.d.DeMP.d
01 Sep 2023 15:26:46,374 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1037-1_01.d.DeMP.d
01 Sep 2023 15:26:46,374 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\SIL-04.d.DeMP.d
01 Sep 2023 15:26:46,374 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\DB-05.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\DB_06.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC02-05.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC01-05.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC03_04.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC02_04.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC02_01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC03_01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\DB-04.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1034_01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC04_01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\BB01_01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1031_01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1010_01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1051_01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\SIL_08.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\MB03_01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\DB-02.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\SIL-01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\SIL_03.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC01-02.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC02-02.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\SIL-06.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\SIL-02.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1055-01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\SIL-08.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1012-01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1038-1_01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1015-01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1011-01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\SIL_07.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1018-01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1053-01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC03_03.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC02_03.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1004_01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC01-03.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1057-01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1013-01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC03_02.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1052-02.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\DB_02.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\MB01-01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC02-04.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC01-04.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\MB02-01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1050-01.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\SIL-03.d.DeMP.d
01 Sep 2023 15:26:46,375 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1019_01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\SIL-09.d.m.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\SIL_06.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC02_02.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1023-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1002-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1045-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1044-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\DB_03.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1003-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1001-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1025-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1047-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1043-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1026-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1006-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1048-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1041-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1040-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1007-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1005-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1042-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1049-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1020-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\SIL-07.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\DB-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1046-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\SIL_02.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC03_05.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\DB-03.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\QC02-03.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\SIL_09.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1009-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1029-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\1008-01.d.DeMP.d
01 Sep 2023 15:26:46,376 WARN : Missed importing 4 chromatograms from sample file D:\2022 05 and 06 sunfish\DB_05.d.DeMP.d
01 Sep 2023 15:26:46,376 INFO : Creating and populating temp tables for Proportion values
01 Sep 2023 15:26:46,488 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
01 Sep 2023 15:26:46,713 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
01 Sep 2023 15:26:46,857 INFO : Cleaning up temp tables
01 Sep 2023 15:26:46,860 INFO : Completed import of Skyline document from Fish-PFAS_2023-09-01_2023-09-01_11-42-44.sky.zip
01 Sep 2023 15:26:46,877 INFO : 100% Done
01 Sep 2023 15:26:46,881 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2023/UNC%20Baker%20Lab%20-%202023%20NC%20Fish%20PFAS/@files/export/xar/experiments_and_runs.xar.exploded/Run168935/Fish-PFAS_2023-09-01_2023-09-01_11-42-44.sky.zip into the system
01 Sep 2023 15:26:46,889 INFO : Done importing xar
01 Sep 2023 15:26:46,890 INFO : Loading pages and webpart properties
01 Sep 2023 15:26:46,952 INFO : Done importing 3 page(s) with 5 webpart(s)
01 Sep 2023 15:26:46,952 INFO : Loading File Browser config
01 Sep 2023 15:26:46,952 INFO : Done importing File Browser config
01 Sep 2023 15:26:46,953 INFO : Starting Sample Status Data import
01 Sep 2023 15:26:46,953 INFO : No sample types XAR file to process.
01 Sep 2023 15:26:46,953 INFO : Finished importing Sample Status Data
01 Sep 2023 15:26:46,958 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
01 Sep 2023 15:26:46,962 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
01 Sep 2023 15:26:46,963 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
01 Sep 2023 15:26:46,963 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
01 Sep 2023 15:26:46,964 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
01 Sep 2023 15:26:46,964 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
01 Sep 2023 15:26:46,966 INFO : Creating a new TargetedMS experiment entry in panoramapublic.ExperimentAnnotations.
01 Sep 2023 15:26:46,972 INFO : Moving files to folder /Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS and creating symlinks
01 Sep 2023 15:26:46,974 DEBUG: Directory created: /data/labkey/files/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44
01 Sep 2023 15:26:46,978 DEBUG: Moved file /data/labkey/files/UNC - Baker Lab/2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44/Fish-PFAS_2023-09-01.sky to /data/labkey/files/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44/Fish-PFAS_2023-09-01.sky
01 Sep 2023 15:26:46,980 DEBUG: Created symlink /data/labkey/files/UNC - Baker Lab/2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44/Fish-PFAS_2023-09-01.sky targeting /data/labkey/files/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44/Fish-PFAS_2023-09-01.sky
01 Sep 2023 15:26:46,983 DEBUG: Moved file /data/labkey/files/UNC - Baker Lab/2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44/Fish-PFAS_2023-09-01.skyl to /data/labkey/files/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44/Fish-PFAS_2023-09-01.skyl
01 Sep 2023 15:26:46,985 DEBUG: Created symlink /data/labkey/files/UNC - Baker Lab/2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44/Fish-PFAS_2023-09-01.skyl targeting /data/labkey/files/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44/Fish-PFAS_2023-09-01.skyl
01 Sep 2023 15:26:46,988 DEBUG: Moved file /data/labkey/files/UNC - Baker Lab/2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44/Fish-PFAS_2023-09-01.skyd to /data/labkey/files/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44/Fish-PFAS_2023-09-01.skyd
01 Sep 2023 15:26:46,990 DEBUG: Created symlink /data/labkey/files/UNC - Baker Lab/2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44/Fish-PFAS_2023-09-01.skyd targeting /data/labkey/files/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44/Fish-PFAS_2023-09-01.skyd
01 Sep 2023 15:26:46,993 DEBUG: Moved file /data/labkey/files/UNC - Baker Lab/2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44/Fish-PFAS_2023-09-01.sky.view to /data/labkey/files/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44/Fish-PFAS_2023-09-01.sky.view
01 Sep 2023 15:26:46,994 DEBUG: Created symlink /data/labkey/files/UNC - Baker Lab/2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44/Fish-PFAS_2023-09-01.sky.view targeting /data/labkey/files/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44/Fish-PFAS_2023-09-01.sky.view
01 Sep 2023 15:26:46,995 DEBUG: Directory created: /data/labkey/files/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS/@files/RawFiles
01 Sep 2023 15:26:46,996 DEBUG: Moved file /data/labkey/files/UNC - Baker Lab/2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44.sky.zip to /data/labkey/files/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44.sky.zip
01 Sep 2023 15:26:46,997 DEBUG: Created symlink /data/labkey/files/UNC - Baker Lab/2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44.sky.zip targeting /data/labkey/files/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44.sky.zip
01 Sep 2023 15:26:46,998 INFO : Aligning data files urls in folder: /Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS
01 Sep 2023 15:26:47,000 DEBUG: Setting filePathRoot on copied run: Fish-PFAS_2023-09-01_2023-09-01_11-42-44.sky.zip to: /data/labkey/files/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS/@files
01 Sep 2023 15:26:47,003 DEBUG: Setting dataFileUri on copied data: Fish-PFAS_2023-09-01.skyd to: /data/labkey/files/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44/Fish-PFAS_2023-09-01.skyd
01 Sep 2023 15:26:47,005 DEBUG: Setting dataFileUri on copied data: Fish-PFAS_2023-09-01_2023-09-01_11-42-44.sky.zip to: /data/labkey/files/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS/@files/Fish-PFAS_2023-09-01_2023-09-01_11-42-44.sky.zip
01 Sep 2023 15:26:47,005 INFO : Importing files metadata.
01 Sep 2023 15:26:47,005 DEBUG: [/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS] Reading files metadata from /data/labkey/files/Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS/@files/export
01 Sep 2023 15:26:47,006 INFO :
01 Sep 2023 15:26:47,006 INFO : Experiment import completed successfully.
01 Sep 2023 15:26:47,006 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask'
01 Sep 2023 15:26:47,030 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask' at location 'webserver-high-priority'
01 Sep 2023 15:26:47,030 INFO :
01 Sep 2023 15:26:47,030 INFO : Checking for library folders.
01 Sep 2023 15:26:47,032 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask'
01 Sep 2023 15:26:47,050 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'
01 Sep 2023 15:26:47,050 INFO :
01 Sep 2023 15:26:47,050 INFO : Finishing up experiment copy.
01 Sep 2023 15:26:47,052 INFO : Updating TargetedMS experiment entry in target folder /Panorama Public/2023/UNC Baker Lab - 2023 NC Fish PFAS
01 Sep 2023 15:26:47,053 INFO : Setting version on new experiment to 1
01 Sep 2023 15:26:47,055 INFO : Updating permanent link to point to the new copy of the data.
01 Sep 2023 15:26:47,060 INFO : Removing copy permissions given to Panorama Public
01 Sep 2023 15:26:47,071 INFO : Adding read permissions to all users that are folder admins in the source folder.
01 Sep 2023 15:26:47,071 INFO : Assigning ReaderRole to jndodds@unc.edu
01 Sep 2023 15:26:47,071 INFO : Assigning ReaderRole to rlberes@unc.edu
01 Sep 2023 15:26:47,071 INFO : Assigning ReaderRole to akstewar@ncsu.edu
01 Sep 2023 15:26:47,071 INFO : Assigning ReaderRole to mrfoster@ncsu.edu
01 Sep 2023 15:26:47,071 INFO : Assigning ReaderRole to erinmsb@unc.edu
01 Sep 2023 15:26:47,071 INFO : Assigning ReaderRole to melanie.odenkirk@colostate.edu
01 Sep 2023 15:26:47,071 INFO : Assigning ReaderRole to kikirkwo@ncsu.edu
01 Sep 2023 15:26:47,071 INFO : Assigning ReaderRole to aboatman@unc.edu
01 Sep 2023 15:26:47,071 INFO : Assigning PanoramaPublicSubmitterRole to erinmsb@unc.edu
01 Sep 2023 15:26:47,071 INFO : Assigning PanoramaPublicSubmitterRole to aboatman@unc.edu
01 Sep 2023 15:26:47,082 INFO : User erinmsb@unc.edu is already a member of group Panorama Public Submitters
01 Sep 2023 15:26:47,082 INFO : Adding user aboatman@unc.edu to group Panorama Public Submitters
01 Sep 2023 15:26:47,084 INFO : Updating the 'Raw Data' tab configuration
01 Sep 2023 15:26:47,084 INFO : Making folder public.
01 Sep 2023 15:26:47,094 INFO : Hiding the Data Pipeline tab.
01 Sep 2023 15:26:47,098 INFO : Updating Submission. Setting copiedExperimentId to 1678
01 Sep 2023 15:26:48,562 INFO : Assigning a DOI.
01 Sep 2023 15:26:49,537 INFO : Assigned DOI: 10.6069/qjsd-js69
01 Sep 2023 15:26:49,568 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask'