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Validating data for experiment Id: 1716, validation Id: 647

Ontario Tech U Aquatic Omics - Pollard RT 2023

Job Status

Created: 2023-10-30 21:10:29
Modified: 2023-10-30 21:10:45
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Validating data for experiment Id: 1716, validation Id: 647
File Path: /data/labkey/files/Panorama Public/2023/Ontario Tech U Aquatic Omics - Pollard RT 2023/@files/Experiment_Validation_1801_2023-10-30_21-10-29.log
Files: Experiment_Validation_1801_2023-10-30_21-10-29.log
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Log File


30 Oct 2023 21:10:29,646 INFO : Validating data for a ProteomeXchange submission.
30 Oct 2023 21:10:29,647 INFO : =======================================
30 Oct 2023 21:10:29,697 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask' at location 'webserver'
30 Oct 2023 21:10:29,698 INFO : Validating data for experiment Id: 1716, validation Id: 647
30 Oct 2023 21:10:29,750 INFO : Validating data for 2 Skyline documents in 2 folders
30 Oct 2023 21:10:39,139 INFO : Sample file validation for Skyline document: all plasma all groups_2023-04-20_14-40-18.sky.zip
30 Oct 2023 21:10:39,139 INFO :   Found all sample files.
30 Oct 2023 21:10:42,586 INFO : Sample file validation for Skyline document: Kidney lib 1 BIG_2023-08-09_15-26-32.sky.zip
30 Oct 2023 21:10:42,586 INFO :   Found all sample files.
30 Oct 2023 21:10:42,690 INFO : Modifications validation:
30 Oct 2023 21:10:42,690 INFO : VALID MODIFICATIONS:
30 Oct 2023 21:10:42,690 INFO : 5272: Phospho (ST): UNIMOD:21 - Phospho
30 Oct 2023 21:10:42,690 INFO :     all plasma all groups_2023-04-20_14-40-18.sky.zip
30 Oct 2023 21:10:42,690 INFO :     Kidney lib 1 BIG_2023-08-09_15-26-32.sky.zip
30 Oct 2023 21:10:42,690 INFO : 5273: Gln->pyro-Glu (N-term Q): UNIMOD:28 - Gln->pyro-Glu
30 Oct 2023 21:10:42,690 INFO :     all plasma all groups_2023-04-20_14-40-18.sky.zip
30 Oct 2023 21:10:42,690 INFO :     Kidney lib 1 BIG_2023-08-09_15-26-32.sky.zip
30 Oct 2023 21:10:42,690 INFO : 5274: Phospho (Y): UNIMOD:21 - Phospho
30 Oct 2023 21:10:42,690 INFO :     all plasma all groups_2023-04-20_14-40-18.sky.zip
30 Oct 2023 21:10:42,690 INFO :     Kidney lib 1 BIG_2023-08-09_15-26-32.sky.zip
30 Oct 2023 21:10:42,690 INFO : 5275: Carbamyl (K): UNIMOD:5 - Carbamyl
30 Oct 2023 21:10:42,690 INFO :     all plasma all groups_2023-04-20_14-40-18.sky.zip
30 Oct 2023 21:10:42,690 INFO :     Kidney lib 1 BIG_2023-08-09_15-26-32.sky.zip
30 Oct 2023 21:10:42,690 INFO : 5276: Carbamidomethyl (C): UNIMOD:4 - Carbamidomethyl
30 Oct 2023 21:10:42,690 INFO :     all plasma all groups_2023-04-20_14-40-18.sky.zip
30 Oct 2023 21:10:42,690 INFO :     Kidney lib 1 BIG_2023-08-09_15-26-32.sky.zip
30 Oct 2023 21:10:42,690 INFO : 5277: Oxidation (M): UNIMOD:35 - Oxidation
30 Oct 2023 21:10:42,690 INFO :     all plasma all groups_2023-04-20_14-40-18.sky.zip
30 Oct 2023 21:10:42,690 INFO :     Kidney lib 1 BIG_2023-08-09_15-26-32.sky.zip
30 Oct 2023 21:10:42,690 INFO : INVALID MODIFICATIONS (No Unimod ID):
30 Oct 2023 21:10:42,692 INFO : Validating spectral library: all plasma all groups.blib
30 Oct 2023 21:10:44,239 INFO : 'all plasma all groups' (all plasma all groups.blib) library in 1 Skyline documents was built with 152 raw files; 152 peptide Id files. Status: VALID
30 Oct 2023 21:10:44,240 INFO : Validating spectral library: Kidney lib 2_small_lib.blib
30 Oct 2023 21:10:44,592 INFO : 'kdiney lib 2 small' (Kidney lib 2_small_lib.blib) library in 1 Skyline documents was built with 30 raw files; 30 peptide Id files. Status: VALID
30 Oct 2023 21:10:44,594 INFO : Validating spectral library: Kidney lib 1 BIG.blib
30 Oct 2023 21:10:45,266 INFO : 'Kidney lib 1 BIG' (Kidney lib 1 BIG.blib) library in 1 Skyline documents was built with 70 raw files; 70 peptide Id files. Status: VALID
30 Oct 2023 21:10:45,266 INFO : Spectral library validation complete.
30 Oct 2023 21:10:45,268 INFO : Data validation is complete. Status is Complete
30 Oct 2023 21:10:45,268 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask'