04 Jun 2023 20:16:18,129 INFO : Copying experiment "Environmental Conditions Elicit a Slow but Enduring Response of Histone Post-Translational Modifications in Mozambique Tilapia" from folder /Kueltz Lab - UCDavis/DIA assays/EAM_chap3 to /Panorama Public/2023/Kueltz Lab UCDavis - EAM_chap3
04 Jun 2023 20:16:18,129 INFO : =======================================
04 Jun 2023 20:16:18,148 DEBUG: Resetting Job ID: 04cb1bd4-e57d-103b-82c0-fea6ddf5f252
04 Jun 2023 20:16:18,171 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask' at location 'webserver-high-priority'
04 Jun 2023 20:16:18,171 INFO : 
04 Jun 2023 20:16:18,171 INFO : Exporting experiment.
04 Jun 2023 20:40:39,139 INFO : Exporting files metadata.
04 Jun 2023 20:40:39,139 DEBUG: [/Kueltz Lab - UCDavis/DIA assays/EAM_chap3]  Writing files metadata to /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/Kueltz Lab UCDavis - EAM_chap3_04cb1bb2-e57d-103b-82c0-fea6ddf5f252/_temp__2023-06-04_20-16-18/export
04 Jun 2023 20:40:39,194 INFO : 
04 Jun 2023 20:40:39,194 INFO : Experiment export completed successfully.
04 Jun 2023 20:40:39,194 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask'
04 Jun 2023 20:40:39,218 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask' at location 'webserver-high-priority'
04 Jun 2023 20:40:39,218 INFO : 
04 Jun 2023 20:40:39,218 INFO : Importing experiment.
04 Jun 2023 20:40:39,219 DEBUG: [/Panorama Public/2023/Kueltz Lab UCDavis - EAM_chap3] Importing folder properties from: /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/Kueltz Lab UCDavis - EAM_chap3_04cb1bb2-e57d-103b-82c0-fea6ddf5f252/_temp__2023-06-04_20-16-18/export
04 Jun 2023 20:40:39,220 INFO : Loading folder properties (folder type, settings and active modules)
04 Jun 2023 20:40:39,220 DEBUG: [/Panorama Public/2023/Kueltz Lab UCDavis - EAM_chap3] Folder type: Targeted MS
04 Jun 2023 20:40:39,220 DEBUG: [/Panorama Public/2023/Kueltz Lab UCDavis - EAM_chap3] Active modules: FileContent, Wiki, Issues, Core, Pipeline, Announcements, MS2, PanoramaPublic, TargetedMS, Query, API, Assay, Search, Experiment
04 Jun 2023 20:40:39,283 INFO : Done importing folder properties (folder type, settings and active modules)
04 Jun 2023 20:40:39,284 INFO : Loading container specific module properties
04 Jun 2023 20:40:39,293 INFO : Done importing container specific module properties
04 Jun 2023 20:40:39,295 INFO : Loading etl definitions
04 Jun 2023 20:40:39,296 INFO : Loading wikis
04 Jun 2023 20:40:39,297 INFO : 0 wikis imported
04 Jun 2023 20:40:39,297 INFO : Done importing wikis
04 Jun 2023 20:40:39,297 INFO : Starting to copy files
04 Jun 2023 20:42:41,090 INFO : 17 files copied, now copying EAM0047_SWSW4G_2-E,7_01_5797.d.zip
04 Jun 2023 20:44:49,875 INFO : 27 files copied, now copying EAM0047_FWFW6G_2-C,3_01_5777.d.zip
04 Jun 2023 20:46:55,646 INFO : 37 files copied, now copying EAM0047_SWSW7G_2-F,2_01_5800.d.zip
04 Jun 2023 20:48:59,343 INFO : 46 files copied, now copying EAM0046_SWFW8G_2-B,5_01_5768.d.zip
04 Jun 2023 20:51:09,543 INFO : 56 files copied, now copying EAM0046_FWFW6G_1-D,1_01_5731.d.zip
04 Jun 2023 20:53:16,378 INFO : 66 files copied, now copying EAM0046_FWSW6G_1-E,4_01_5741.d.zip
04 Jun 2023 20:55:24,230 INFO : 77 files copied, now copying EAM0046_SWSW5G_1-F,8_01_5753.d.zip
04 Jun 2023 20:57:25,819 INFO : 86 files copied, now copying EAM0046_SWFW5G_2-B,2_01_5765.d.zip
04 Jun 2023 20:57:56,307 INFO : 88 files copied, now copying EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama.skyd
04 Jun 2023 20:58:07,255 INFO : 93 files copied, now copying EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama.skyd
04 Jun 2023 20:58:10,428 INFO : Copied 98 files
04 Jun 2023 20:58:10,428 INFO : Ensuring exp.data rows exist for imported files
04 Jun 2023 20:58:11,345 INFO : Starting Sample Type and Data Class import
04 Jun 2023 20:58:11,346 INFO : No types XAR file to process.
04 Jun 2023 20:58:11,346 INFO : Finished importing Sample Types and Data Classes
04 Jun 2023 20:58:11,347 INFO : Loading xar
04 Jun 2023 20:58:15,082 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-11652:TargetedMS.ImportSkyZip'
04 Jun 2023 20:58:15,084 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-11652:TargetedMS.ImportSkyZip.Core'
04 Jun 2023 20:58:15,085 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-11652:TargetedMS.ImportSkyZip.Output'
04 Jun 2023 20:58:15,085 DEBUG: Protocol import complete
04 Jun 2023 20:58:15,086 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-11652:Environmental+Conditions+Elicit+a+Slow+but+Enduring+Response+of+Histone+Post-Translational+Modifications+in+Mozambique+Tilapia'
04 Jun 2023 20:58:15,086 DEBUG: Experiment/Run group import complete
04 Jun 2023 20:58:15,094 DEBUG: Protocol action set import complete
04 Jun 2023 20:58:15,102 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11652:TargetedMS.ImportSkyZip'
04 Jun 2023 20:58:15,107 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11652:c614f04f-9a2f-103b-b327-fea6ddf5f3bc'
04 Jun 2023 20:58:15,110 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11652:6c9b02ee-9a2e-103b-b327-fea6ddf5f3bc'
04 Jun 2023 20:58:15,110 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11652:TargetedMS.ImportSkyZip.Core'
04 Jun 2023 20:58:15,112 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11652:TargetedMS.ImportSkyZip.Output'
04 Jun 2023 20:58:15,113 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11652:c615013d-9a2f-103b-b327-fea6ddf5f3bc'
04 Jun 2023 20:58:15,117 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11652:TargetedMS.ImportSkyZip'
04 Jun 2023 20:58:15,121 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11652:2ee05639-9a31-103b-b327-fea6ddf5f3bc'
04 Jun 2023 20:58:15,124 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11652:2ee05592-9a31-103b-b327-fea6ddf5f3bc'
04 Jun 2023 20:58:15,124 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11652:TargetedMS.ImportSkyZip.Core'
04 Jun 2023 20:58:15,126 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11652:TargetedMS.ImportSkyZip.Output'
04 Jun 2023 20:58:15,126 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11652:237e7abe-9a32-103b-b327-fea6ddf5f3bc'
04 Jun 2023 20:58:15,127 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/Kueltz%20Lab%20UCDavis%20-%20EAM_chap3_04cb1bb2-e57d-103b-82c0-fea6ddf5f252/_temp__2023-06-04_20-16-18/export/xar/experiments_and_runs.xar.exploded/Run152046/EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama_2023-02-28_23-19-48/EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama.skyd into the system
04 Jun 2023 20:58:15,128 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/Kueltz%20Lab%20UCDavis%20-%20EAM_chap3_04cb1bb2-e57d-103b-82c0-fea6ddf5f252/_temp__2023-06-04_20-16-18/export/xar/experiments_and_runs.xar.exploded/Run152046/EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama_2023-02-28_23-19-48/EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama.skyd into the system
04 Jun 2023 20:58:15,128 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/Kueltz%20Lab%20UCDavis%20-%20EAM_chap3_04cb1bb2-e57d-103b-82c0-fea6ddf5f252/_temp__2023-06-04_20-16-18/export/xar/experiments_and_runs.xar.exploded/Run152046/EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama_2023-02-28_23-19-48.sky.zip into the system
04 Jun 2023 20:58:15,129 INFO : Starting import from EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama_2023-02-28_23-19-48.sky.zip
04 Jun 2023 20:58:15,132 INFO : Starting to import Skyline document from EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama_2023-02-28_23-19-48.sky.zip
04 Jun 2023 20:58:15,145 INFO : Expanding Oremo_Histones_V8E_Quant.elib
04 Jun 2023 20:58:16,156 INFO : Expanding EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama.skyd
04 Jun 2023 20:58:16,661 INFO : Expanding EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama.sky.view
04 Jun 2023 20:58:16,662 INFO : Expanding EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama.sky
04 Jun 2023 20:58:16,928 INFO : Expanding EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama.skyl
04 Jun 2023 20:58:17,059 WARN : The version of this Skyline document is 22.2. This is newer than the highest supported version 22.13
04 Jun 2023 20:58:17,427 DEBUG: Starting to load chromatogram headers
04 Jun 2023 20:58:17,485 DEBUG: Done loading chromatogram headers
04 Jun 2023 20:58:17,716 INFO : Inserting XP_003438147.1
04 Jun 2023 20:58:17,888 INFO : 1% Done
04 Jun 2023 20:58:18,294 INFO : 2% Done
04 Jun 2023 20:58:18,725 INFO : 3% Done
04 Jun 2023 20:58:19,224 INFO : 4% Done
04 Jun 2023 20:58:19,789 INFO : 5% Done
04 Jun 2023 20:58:19,909 DEBUG: Inserted 50 peptides
04 Jun 2023 20:58:20,187 DEBUG: Total peptides inserted: 56
04 Jun 2023 20:58:20,187 INFO : Inserting XP_003446112.1
04 Jun 2023 20:58:20,223 DEBUG: Total peptides inserted: 1
04 Jun 2023 20:58:20,223 INFO : Inserting XP_003448795.2
04 Jun 2023 20:58:20,297 INFO : 6% Done
04 Jun 2023 20:58:20,793 INFO : 7% Done
04 Jun 2023 20:58:20,921 DEBUG: Total peptides inserted: 16
04 Jun 2023 20:58:20,921 INFO : Inserting XP_003448939.1
04 Jun 2023 20:58:21,286 INFO : 8% Done
04 Jun 2023 20:58:21,781 INFO : 9% Done
04 Jun 2023 20:58:22,225 INFO : 10% Done
04 Jun 2023 20:58:22,743 INFO : 11% Done
04 Jun 2023 20:58:22,855 DEBUG: Total peptides inserted: 44
04 Jun 2023 20:58:22,855 INFO : Inserting XP_003451196.1
04 Jun 2023 20:58:23,209 INFO : 12% Done
04 Jun 2023 20:58:23,697 INFO : 13% Done
04 Jun 2023 20:58:24,126 INFO : 14% Done
04 Jun 2023 20:58:24,592 INFO : 15% Done
04 Jun 2023 20:58:24,669 DEBUG: Inserted 50 peptides
04 Jun 2023 20:58:25,081 INFO : 16% Done
04 Jun 2023 20:58:25,679 INFO : 17% Done
04 Jun 2023 20:58:26,112 INFO : 18% Done
04 Jun 2023 20:58:26,590 INFO : 19% Done
04 Jun 2023 20:58:26,861 DEBUG: Inserted 100 peptides
04 Jun 2023 20:58:27,049 INFO : 20% Done
04 Jun 2023 20:58:27,510 INFO : 21% Done
04 Jun 2023 20:58:27,983 INFO : 22% Done
04 Jun 2023 20:58:28,460 INFO : 23% Done
04 Jun 2023 20:58:28,918 INFO : 24% Done
04 Jun 2023 20:58:29,264 DEBUG: Inserted 150 peptides
04 Jun 2023 20:58:29,443 INFO : 25% Done
04 Jun 2023 20:58:30,168 DEBUG: Total peptides inserted: 170
04 Jun 2023 20:58:30,168 INFO : Inserting XP_003451211.1
04 Jun 2023 20:58:30,488 INFO : 26% Done
04 Jun 2023 20:58:31,021 INFO : 27% Done
04 Jun 2023 20:58:31,351 DEBUG: Total peptides inserted: 24
04 Jun 2023 20:58:31,351 INFO : Inserting XP_003455046.1
04 Jun 2023 20:58:31,425 DEBUG: Total peptides inserted: 2
04 Jun 2023 20:58:31,426 INFO : Inserting XP_003458968.1
04 Jun 2023 20:58:31,482 DEBUG: Total peptides inserted: 1
04 Jun 2023 20:58:31,482 INFO : Inserting XP_003459572.1
04 Jun 2023 20:58:31,518 INFO : 28% Done
04 Jun 2023 20:58:31,599 DEBUG: Total peptides inserted: 3
04 Jun 2023 20:58:31,599 INFO : Inserting XP_003459589.1
04 Jun 2023 20:58:31,988 INFO : 29% Done
04 Jun 2023 20:58:32,454 INFO : 30% Done
04 Jun 2023 20:58:32,968 INFO : 31% Done
04 Jun 2023 20:58:33,525 INFO : 32% Done
04 Jun 2023 20:58:33,741 DEBUG: Inserted 50 peptides
04 Jun 2023 20:58:33,988 INFO : 33% Done
04 Jun 2023 20:58:34,501 INFO : 34% Done
04 Jun 2023 20:58:34,552 DEBUG: Total peptides inserted: 70
04 Jun 2023 20:58:34,552 INFO : Inserting XP_005461836.1
04 Jun 2023 20:58:34,966 INFO : 35% Done
04 Jun 2023 20:58:35,041 DEBUG: Total peptides inserted: 11
04 Jun 2023 20:58:35,041 INFO : Inserting XP_005463512.2
04 Jun 2023 20:58:35,466 INFO : 36% Done
04 Jun 2023 20:58:35,893 INFO : 37% Done
04 Jun 2023 20:58:36,339 INFO : 38% Done
04 Jun 2023 20:58:36,701 DEBUG: Inserted 50 peptides
04 Jun 2023 20:58:36,792 INFO : 39% Done
04 Jun 2023 20:58:37,254 INFO : 40% Done
04 Jun 2023 20:58:37,305 DEBUG: Total peptides inserted: 61
04 Jun 2023 20:58:37,305 INFO : Inserting XP_005464230.1
04 Jun 2023 20:58:37,808 INFO : 41% Done
04 Jun 2023 20:58:38,147 DEBUG: Total peptides inserted: 20
04 Jun 2023 20:58:38,147 INFO : Inserting XP_013130603.1
04 Jun 2023 20:58:38,218 DEBUG: Total peptides inserted: 2
04 Jun 2023 20:58:38,218 INFO : Inserting XP_019209842.1
04 Jun 2023 20:58:38,300 INFO : 42% Done
04 Jun 2023 20:58:38,752 INFO : 43% Done
04 Jun 2023 20:58:39,223 INFO : 44% Done
04 Jun 2023 20:58:39,725 INFO : 45% Done
04 Jun 2023 20:58:39,772 DEBUG: Total peptides inserted: 37
04 Jun 2023 20:58:39,772 INFO : Inserting XP_019209843.1
04 Jun 2023 20:58:39,968 DEBUG: Total peptides inserted: 7
04 Jun 2023 20:58:39,968 INFO : Inserting XP_019209844.1
04 Jun 2023 20:58:40,011 DEBUG: Total peptides inserted: 1
04 Jun 2023 20:58:40,011 INFO : Inserting XP_019209845.1
04 Jun 2023 20:58:40,125 INFO : 46% Done
04 Jun 2023 20:58:40,359 DEBUG: Total peptides inserted: 13
04 Jun 2023 20:58:40,359 INFO : Inserting XP_019210164.1
04 Jun 2023 20:58:40,545 INFO : 47% Done
04 Jun 2023 20:58:41,018 INFO : 48% Done
04 Jun 2023 20:58:41,351 DEBUG: Total peptides inserted: 31
04 Jun 2023 20:58:41,351 INFO : Inserting XP_019218826.1
04 Jun 2023 20:58:41,495 DEBUG: Total peptides inserted: 3
04 Jun 2023 20:58:41,495 INFO : Inserting XP_019219600.2
04 Jun 2023 20:58:41,509 INFO : 49% Done
04 Jun 2023 20:58:41,775 DEBUG: Total peptides inserted: 4
04 Jun 2023 20:58:41,775 INFO : Inserting XP_025766508.1
04 Jun 2023 20:58:41,779 INFO : Inserting XP_025766521.1
04 Jun 2023 20:58:42,074 INFO : 50% Done
04 Jun 2023 20:58:42,546 INFO : 51% Done
04 Jun 2023 20:58:43,006 INFO : 52% Done
04 Jun 2023 20:58:43,485 INFO : 53% Done
04 Jun 2023 20:58:44,001 INFO : 54% Done
04 Jun 2023 20:58:44,001 DEBUG: Inserted 50 peptides
04 Jun 2023 20:58:44,236 DEBUG: Total peptides inserted: 55
04 Jun 2023 20:58:44,236 INFO : Inserting Decoys
04 Jun 2023 20:58:44,430 INFO : 55% Done
04 Jun 2023 20:58:44,999 INFO : 56% Done
04 Jun 2023 20:58:45,488 INFO : 57% Done
04 Jun 2023 20:58:45,987 INFO : 58% Done
04 Jun 2023 20:58:46,214 DEBUG: Inserted 50 peptides
04 Jun 2023 20:58:46,548 INFO : 59% Done
04 Jun 2023 20:58:46,995 INFO : 60% Done
04 Jun 2023 20:58:47,456 INFO : 61% Done
04 Jun 2023 20:58:47,850 DEBUG: Inserted 100 peptides
04 Jun 2023 20:58:47,930 INFO : 62% Done
04 Jun 2023 20:58:48,407 INFO : 63% Done
04 Jun 2023 20:58:48,865 INFO : 64% Done
04 Jun 2023 20:58:49,306 INFO : 65% Done
04 Jun 2023 20:58:49,434 DEBUG: Inserted 150 peptides
04 Jun 2023 20:58:49,767 INFO : 66% Done
04 Jun 2023 20:58:50,273 INFO : 67% Done
04 Jun 2023 20:58:50,778 INFO : 68% Done
04 Jun 2023 20:58:51,287 DEBUG: Inserted 200 peptides
04 Jun 2023 20:58:51,305 INFO : 69% Done
04 Jun 2023 20:58:51,808 INFO : 70% Done
04 Jun 2023 20:58:52,259 INFO : 71% Done
04 Jun 2023 20:58:52,856 INFO : 72% Done
04 Jun 2023 20:58:53,041 DEBUG: Inserted 250 peptides
04 Jun 2023 20:58:53,348 INFO : 73% Done
04 Jun 2023 20:58:53,792 INFO : 74% Done
04 Jun 2023 20:58:54,565 DEBUG: Inserted 300 peptides
04 Jun 2023 20:58:54,661 INFO : 75% Done
04 Jun 2023 20:58:55,143 INFO : 76% Done
04 Jun 2023 20:58:55,641 INFO : 77% Done
04 Jun 2023 20:58:56,132 INFO : 78% Done
04 Jun 2023 20:58:56,132 DEBUG: Inserted 350 peptides
04 Jun 2023 20:58:56,634 INFO : 79% Done
04 Jun 2023 20:58:57,022 INFO : 80% Done
04 Jun 2023 20:58:57,246 INFO : 81% Done
04 Jun 2023 20:58:57,399 DEBUG: Inserted 400 peptides
04 Jun 2023 20:58:57,476 INFO : 82% Done
04 Jun 2023 20:58:57,707 INFO : 83% Done
04 Jun 2023 20:58:57,951 INFO : 84% Done
04 Jun 2023 20:58:58,180 INFO : 85% Done
04 Jun 2023 20:58:58,331 DEBUG: Inserted 450 peptides
04 Jun 2023 20:58:58,400 INFO : 86% Done
04 Jun 2023 20:58:58,599 INFO : 87% Done
04 Jun 2023 20:58:58,826 INFO : 88% Done
04 Jun 2023 20:58:59,032 INFO : 89% Done
04 Jun 2023 20:58:59,068 DEBUG: Inserted 500 peptides
04 Jun 2023 20:58:59,243 INFO : 90% Done
04 Jun 2023 20:58:59,471 INFO : 91% Done
04 Jun 2023 20:58:59,676 INFO : 92% Done
04 Jun 2023 20:58:59,708 DEBUG: Inserted 550 peptides
04 Jun 2023 20:58:59,886 INFO : 93% Done
04 Jun 2023 20:59:00,095 INFO : 94% Done
04 Jun 2023 20:59:00,347 INFO : 95% Done
04 Jun 2023 20:59:00,547 DEBUG: Inserted 600 peptides
04 Jun 2023 20:59:00,569 INFO : 96% Done
04 Jun 2023 20:59:00,778 INFO : 97% Done
04 Jun 2023 20:59:01,023 INFO : 98% Done
04 Jun 2023 20:59:01,138 DEBUG: Total peptides inserted: 632
04 Jun 2023 20:59:01,138 INFO : None of the 275160 TransitionChromInfos in the file were imported because they exceed the limit of 100000 and there are more than 1000 precursors
04 Jun 2023 21:01:58,977 INFO : Updated 45960 PrecursorChromInfos with transition chromatogram index information
04 Jun 2023 21:01:58,979 INFO : Done parsing Skyline document.
04 Jun 2023 21:06:16,730 INFO : Creating and populating temp tables for Proportion values
04 Jun 2023 21:06:17,221 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
04 Jun 2023 21:06:19,283 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
04 Jun 2023 21:06:20,660 INFO : Cleaning up temp tables
04 Jun 2023 21:06:20,664 INFO : Completed import of Skyline document from EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama_2023-02-28_23-19-48.sky.zip
04 Jun 2023 21:06:20,672 INFO : 100% Done
04 Jun 2023 21:06:20,677 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/Kueltz%20Lab%20UCDavis%20-%20EAM_chap3_04cb1bb2-e57d-103b-82c0-fea6ddf5f252/_temp__2023-06-04_20-16-18/export/xar/experiments_and_runs.xar.exploded/Run152046/EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama_2023-02-28_23-19-48.sky.zip into the system
04 Jun 2023 21:06:20,677 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/Kueltz%20Lab%20UCDavis%20-%20EAM_chap3_04cb1bb2-e57d-103b-82c0-fea6ddf5f252/_temp__2023-06-04_20-16-18/export/xar/experiments_and_runs.xar.exploded/Run152048/EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama_2023-02-28_23-31-11/EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama.skyd into the system
04 Jun 2023 21:06:20,677 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/Kueltz%20Lab%20UCDavis%20-%20EAM_chap3_04cb1bb2-e57d-103b-82c0-fea6ddf5f252/_temp__2023-06-04_20-16-18/export/xar/experiments_and_runs.xar.exploded/Run152048/EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama_2023-02-28_23-31-11/EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama.skyd into the system
04 Jun 2023 21:06:20,677 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/Kueltz%20Lab%20UCDavis%20-%20EAM_chap3_04cb1bb2-e57d-103b-82c0-fea6ddf5f252/_temp__2023-06-04_20-16-18/export/xar/experiments_and_runs.xar.exploded/Run152048/EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama_2023-02-28_23-31-11.sky.zip into the system
04 Jun 2023 21:06:20,679 INFO : Starting import from EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama_2023-02-28_23-31-11.sky.zip
04 Jun 2023 21:06:20,681 INFO : Starting to import Skyline document from EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama_2023-02-28_23-31-11.sky.zip
04 Jun 2023 21:06:20,688 INFO : Expanding Oremo_Histones_V8DE_Quant.elib
04 Jun 2023 21:06:24,342 INFO : Expanding EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama.skyd
04 Jun 2023 21:06:24,911 INFO : Expanding EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama.sky.view
04 Jun 2023 21:06:24,911 INFO : Expanding EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama.sky
04 Jun 2023 21:06:25,187 INFO : Expanding EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama.skyl
04 Jun 2023 21:06:25,377 WARN : The version of this Skyline document is 22.2. This is newer than the highest supported version 22.13
04 Jun 2023 21:06:25,790 DEBUG: Starting to load chromatogram headers
04 Jun 2023 21:06:25,853 DEBUG: Done loading chromatogram headers
04 Jun 2023 21:06:26,195 INFO : Inserting XP_003448939.1
04 Jun 2023 21:06:26,556 INFO : 1% Done
04 Jun 2023 21:06:27,139 INFO : 2% Done
04 Jun 2023 21:06:27,773 INFO : 3% Done
04 Jun 2023 21:06:28,487 INFO : 4% Done
04 Jun 2023 21:06:28,968 DEBUG: Inserted 50 peptides
04 Jun 2023 21:06:29,082 INFO : 5% Done
04 Jun 2023 21:06:29,620 INFO : 6% Done
04 Jun 2023 21:06:30,135 INFO : 7% Done
04 Jun 2023 21:06:30,735 INFO : 8% Done
04 Jun 2023 21:06:31,024 DEBUG: Inserted 100 peptides
04 Jun 2023 21:06:31,241 INFO : 9% Done
04 Jun 2023 21:06:31,481 DEBUG: Total peptides inserted: 110
04 Jun 2023 21:06:31,481 INFO : Inserting XP_003459572.1
04 Jun 2023 21:06:31,772 INFO : 10% Done
04 Jun 2023 21:06:32,293 INFO : 11% Done
04 Jun 2023 21:06:32,494 DEBUG: Total peptides inserted: 26
04 Jun 2023 21:06:32,495 INFO : Inserting XP_003451211.1
04 Jun 2023 21:06:32,817 INFO : 12% Done
04 Jun 2023 21:06:33,372 INFO : 13% Done
04 Jun 2023 21:06:33,894 INFO : 14% Done
04 Jun 2023 21:06:34,470 INFO : 15% Done
04 Jun 2023 21:06:34,567 DEBUG: Inserted 50 peptides
04 Jun 2023 21:06:35,065 INFO : 16% Done
04 Jun 2023 21:06:35,608 INFO : 17% Done
04 Jun 2023 21:06:35,905 DEBUG: Total peptides inserted: 78
04 Jun 2023 21:06:35,905 INFO : Inserting XP_003451196.1
04 Jun 2023 21:06:36,150 INFO : 18% Done
04 Jun 2023 21:06:36,675 INFO : 19% Done
04 Jun 2023 21:06:37,212 INFO : 20% Done
04 Jun 2023 21:06:37,681 DEBUG: Inserted 50 peptides
04 Jun 2023 21:06:37,724 INFO : 21% Done
04 Jun 2023 21:06:38,253 INFO : 22% Done
04 Jun 2023 21:06:38,755 INFO : 23% Done
04 Jun 2023 21:06:39,302 INFO : 24% Done
04 Jun 2023 21:06:39,658 DEBUG: Inserted 100 peptides
04 Jun 2023 21:06:39,899 INFO : 25% Done
04 Jun 2023 21:06:41,023 INFO : 26% Done
04 Jun 2023 21:06:41,611 INFO : 27% Done
04 Jun 2023 21:06:42,028 DEBUG: Inserted 150 peptides
04 Jun 2023 21:06:42,084 INFO : 28% Done
04 Jun 2023 21:06:42,608 INFO : 29% Done
04 Jun 2023 21:06:43,172 INFO : 30% Done
04 Jun 2023 21:06:43,739 INFO : 31% Done
04 Jun 2023 21:06:44,127 DEBUG: Inserted 200 peptides
04 Jun 2023 21:06:44,325 INFO : 32% Done
04 Jun 2023 21:06:44,428 DEBUG: Total peptides inserted: 205
04 Jun 2023 21:06:44,429 INFO : Inserting XP_005464230.1
04 Jun 2023 21:06:44,867 DEBUG: Total peptides inserted: 11
04 Jun 2023 21:06:44,867 INFO : Inserting XP_019209842.1
04 Jun 2023 21:06:44,906 INFO : 33% Done
04 Jun 2023 21:06:45,519 INFO : 34% Done
04 Jun 2023 21:06:46,107 DEBUG: Total peptides inserted: 25
04 Jun 2023 21:06:46,107 INFO : Inserting XP_003438147.1
04 Jun 2023 21:06:46,169 INFO : 35% Done
04 Jun 2023 21:06:46,838 INFO : 36% Done
04 Jun 2023 21:06:47,391 INFO : 37% Done
04 Jun 2023 21:06:47,937 INFO : 38% Done
04 Jun 2023 21:06:48,386 DEBUG: Inserted 50 peptides
04 Jun 2023 21:06:48,468 INFO : 39% Done
04 Jun 2023 21:06:48,794 DEBUG: Total peptides inserted: 58
04 Jun 2023 21:06:48,794 INFO : Inserting XP_019219600.2
04 Jun 2023 21:06:48,953 DEBUG: Total peptides inserted: 3
04 Jun 2023 21:06:48,953 INFO : Inserting XP_025766521.1
04 Jun 2023 21:06:49,020 INFO : 40% Done
04 Jun 2023 21:06:49,519 INFO : 41% Done
04 Jun 2023 21:06:50,008 INFO : 42% Done
04 Jun 2023 21:06:50,544 INFO : 43% Done
04 Jun 2023 21:06:50,975 DEBUG: Inserted 50 peptides
04 Jun 2023 21:06:51,139 INFO : 44% Done
04 Jun 2023 21:06:51,632 INFO : 45% Done
04 Jun 2023 21:06:51,744 DEBUG: Total peptides inserted: 70
04 Jun 2023 21:06:51,744 INFO : Inserting XP_025766508.1
04 Jun 2023 21:06:51,837 DEBUG: Total peptides inserted: 2
04 Jun 2023 21:06:51,837 INFO : Inserting XP_003448795.2
04 Jun 2023 21:06:52,272 INFO : 46% Done
04 Jun 2023 21:06:52,540 DEBUG: Total peptides inserted: 13
04 Jun 2023 21:06:52,540 INFO : Inserting XP_019218826.1
04 Jun 2023 21:06:52,819 DEBUG: Total peptides inserted: 7
04 Jun 2023 21:06:52,819 INFO : Inserting XP_019210164.1
04 Jun 2023 21:06:52,903 INFO : 47% Done
04 Jun 2023 21:06:53,020 DEBUG: Total peptides inserted: 5
04 Jun 2023 21:06:53,020 INFO : Inserting XP_019209845.1
04 Jun 2023 21:06:53,249 DEBUG: Total peptides inserted: 5
04 Jun 2023 21:06:53,249 INFO : Inserting XP_005463512.2
04 Jun 2023 21:06:53,423 INFO : 48% Done
04 Jun 2023 21:06:53,914 INFO : 49% Done
04 Jun 2023 21:06:54,448 INFO : 50% Done
04 Jun 2023 21:06:54,863 DEBUG: Inserted 50 peptides
04 Jun 2023 21:06:54,918 INFO : 51% Done
04 Jun 2023 21:06:55,211 DEBUG: Total peptides inserted: 57
04 Jun 2023 21:06:55,211 INFO : Inserting XP_019209843.1
04 Jun 2023 21:06:55,351 DEBUG: Total peptides inserted: 4
04 Jun 2023 21:06:55,351 INFO : Inserting XP_013130603.1
04 Jun 2023 21:06:55,421 DEBUG: Total peptides inserted: 2
04 Jun 2023 21:06:55,421 INFO : Inserting XP_005461836.1
04 Jun 2023 21:06:55,503 INFO : 52% Done
04 Jun 2023 21:06:55,749 DEBUG: Total peptides inserted: 8
04 Jun 2023 21:06:55,749 INFO : Inserting XP_003459589.1
04 Jun 2023 21:06:55,998 INFO : 53% Done
04 Jun 2023 21:06:56,522 INFO : 54% Done
04 Jun 2023 21:06:57,035 INFO : 55% Done
04 Jun 2023 21:06:57,467 DEBUG: Inserted 50 peptides
04 Jun 2023 21:06:57,500 INFO : 56% Done
04 Jun 2023 21:06:57,664 DEBUG: Total peptides inserted: 56
04 Jun 2023 21:06:57,664 INFO : Inserting Decoys
04 Jun 2023 21:06:58,038 INFO : 57% Done
04 Jun 2023 21:06:58,605 INFO : 58% Done
04 Jun 2023 21:06:59,155 DEBUG: Inserted 50 peptides
04 Jun 2023 21:06:59,213 INFO : 59% Done
04 Jun 2023 21:06:59,734 INFO : 60% Done
04 Jun 2023 21:07:00,277 INFO : 61% Done
04 Jun 2023 21:07:00,852 INFO : 62% Done
04 Jun 2023 21:07:00,852 DEBUG: Inserted 100 peptides
04 Jun 2023 21:07:01,353 INFO : 63% Done
04 Jun 2023 21:07:01,910 INFO : 64% Done
04 Jun 2023 21:07:02,354 DEBUG: Inserted 150 peptides
04 Jun 2023 21:07:02,466 INFO : 65% Done
04 Jun 2023 21:07:02,977 INFO : 66% Done
04 Jun 2023 21:07:03,492 INFO : 67% Done
04 Jun 2023 21:07:03,935 DEBUG: Inserted 200 peptides
04 Jun 2023 21:07:04,072 INFO : 68% Done
04 Jun 2023 21:07:04,686 INFO : 69% Done
04 Jun 2023 21:07:05,207 INFO : 70% Done
04 Jun 2023 21:07:05,776 INFO : 71% Done
04 Jun 2023 21:07:05,796 DEBUG: Inserted 250 peptides
04 Jun 2023 21:07:06,039 INFO : 72% Done
04 Jun 2023 21:07:06,289 INFO : 73% Done
04 Jun 2023 21:07:06,513 INFO : 74% Done
04 Jun 2023 21:07:06,611 DEBUG: Inserted 300 peptides
04 Jun 2023 21:07:06,989 INFO : 75% Done
04 Jun 2023 21:07:07,221 INFO : 76% Done
04 Jun 2023 21:07:07,286 DEBUG: Inserted 350 peptides
04 Jun 2023 21:07:07,475 INFO : 77% Done
04 Jun 2023 21:07:07,700 INFO : 78% Done
04 Jun 2023 21:07:07,998 INFO : 79% Done
04 Jun 2023 21:07:08,065 DEBUG: Inserted 400 peptides
04 Jun 2023 21:07:08,268 INFO : 80% Done
04 Jun 2023 21:07:08,501 INFO : 81% Done
04 Jun 2023 21:07:08,735 DEBUG: Inserted 450 peptides
04 Jun 2023 21:07:08,756 INFO : 82% Done
04 Jun 2023 21:07:09,015 INFO : 83% Done
04 Jun 2023 21:07:09,248 INFO : 84% Done
04 Jun 2023 21:07:09,512 INFO : 85% Done
04 Jun 2023 21:07:09,560 DEBUG: Inserted 500 peptides
04 Jun 2023 21:07:09,777 INFO : 86% Done
04 Jun 2023 21:07:10,033 INFO : 87% Done
04 Jun 2023 21:07:10,273 DEBUG: Inserted 550 peptides
04 Jun 2023 21:07:10,311 INFO : 88% Done
04 Jun 2023 21:07:10,563 INFO : 89% Done
04 Jun 2023 21:07:10,853 INFO : 90% Done
04 Jun 2023 21:07:11,125 INFO : 91% Done
04 Jun 2023 21:07:11,140 DEBUG: Inserted 600 peptides
04 Jun 2023 21:07:11,407 INFO : 92% Done
04 Jun 2023 21:07:11,650 INFO : 93% Done
04 Jun 2023 21:07:11,874 DEBUG: Inserted 650 peptides
04 Jun 2023 21:07:11,897 INFO : 94% Done
04 Jun 2023 21:07:12,147 INFO : 95% Done
04 Jun 2023 21:07:12,402 INFO : 96% Done
04 Jun 2023 21:07:12,553 DEBUG: Inserted 700 peptides
04 Jun 2023 21:07:12,634 INFO : 97% Done
04 Jun 2023 21:07:12,976 INFO : 98% Done
04 Jun 2023 21:07:13,117 DEBUG: Total peptides inserted: 745
04 Jun 2023 21:07:13,117 INFO : None of the 337840 TransitionChromInfos in the file were imported because they exceed the limit of 100000 and there are more than 1000 precursors
04 Jun 2023 21:10:12,136 INFO : Updated 52680 PrecursorChromInfos with transition chromatogram index information
04 Jun 2023 21:10:12,139 INFO : Done parsing Skyline document.
04 Jun 2023 21:12:11,216 INFO : Creating and populating temp tables for Proportion values
04 Jun 2023 21:12:11,787 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
04 Jun 2023 21:12:14,201 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
04 Jun 2023 21:12:15,731 INFO : Cleaning up temp tables
04 Jun 2023 21:12:15,734 INFO : Completed import of Skyline document from EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama_2023-02-28_23-31-11.sky.zip
04 Jun 2023 21:12:15,739 INFO : 100% Done
04 Jun 2023 21:12:15,744 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/Kueltz%20Lab%20UCDavis%20-%20EAM_chap3_04cb1bb2-e57d-103b-82c0-fea6ddf5f252/_temp__2023-06-04_20-16-18/export/xar/experiments_and_runs.xar.exploded/Run152048/EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama_2023-02-28_23-31-11.sky.zip into the system
04 Jun 2023 21:12:15,754 INFO : Done importing xar
04 Jun 2023 21:12:15,755 INFO : Loading pages and webpart properties
04 Jun 2023 21:12:15,811 INFO : Done importing 3 page(s) with 5 webpart(s)
04 Jun 2023 21:12:15,811 INFO : Loading File Browser config
04 Jun 2023 21:12:15,811 INFO : Done importing File Browser config
04 Jun 2023 21:12:15,812 INFO : Starting Sample Status Data import
04 Jun 2023 21:12:15,812 INFO : No sample types XAR file to process.
04 Jun 2023 21:12:15,812 INFO : Finished importing Sample Status Data
04 Jun 2023 21:12:15,817 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
04 Jun 2023 21:12:15,818 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
04 Jun 2023 21:12:15,819 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
04 Jun 2023 21:12:15,819 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
04 Jun 2023 21:12:15,819 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
04 Jun 2023 21:12:15,820 INFO : Importing files metadata.
04 Jun 2023 21:12:15,820 DEBUG: [/Panorama Public/2023/Kueltz Lab UCDavis - EAM_chap3]  Reading files metadata from /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/Kueltz Lab UCDavis - EAM_chap3_04cb1bb2-e57d-103b-82c0-fea6ddf5f252/_temp__2023-06-04_20-16-18/export
04 Jun 2023 21:12:15,821 INFO : 
04 Jun 2023 21:12:15,821 INFO : Experiment import completed successfully.
04 Jun 2023 21:12:15,821 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask'
04 Jun 2023 21:13:46,544 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask' at location 'webserver-high-priority'
04 Jun 2023 21:13:46,544 INFO : 
04 Jun 2023 21:13:46,544 INFO : Checking for library folders.
04 Jun 2023 21:13:46,546 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask'
04 Jun 2023 21:13:46,566 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'
04 Jun 2023 21:13:46,566 INFO : 
04 Jun 2023 21:13:46,566 INFO : Finishing up experiment copy.
04 Jun 2023 21:13:46,568 INFO : Creating a new TargetedMS experiment entry in panoramapublic.ExperimentAnnotations.
04 Jun 2023 21:13:46,568 INFO : Setting version on new experiment to 1
04 Jun 2023 21:13:46,568 INFO : Assigning a ProteomeXchange ID.
04 Jun 2023 21:13:46,937 INFO : Assigning a DOI.
04 Jun 2023 21:13:47,637 INFO : Assigned DOI: 10.6069/6pvc-5712
04 Jun 2023 21:13:47,640 INFO : Updating permanent link to point to the new copy of the data.
04 Jun 2023 21:13:47,645 INFO : Removing copy permissions given to Panorama Public
04 Jun 2023 21:13:47,659 INFO : Adding read permissions to all users that are folder admins in the source folder.
04 Jun 2023 21:13:47,660 INFO : Assigning PanoramaPublicSubmitterRole to eajarett@ucdavis.edu
04 Jun 2023 21:13:47,660 INFO : Assigning PanoramaPublicSubmitterRole to dkueltz@ucdavis.edu
04 Jun 2023 21:13:47,660 INFO : Assigning PanoramaPublicSubmitterRole to dkueltz@ucdavis.edu
04 Jun 2023 21:13:47,661 INFO : User eajarett@ucdavis.edu is already a member of group Panorama Public Submitters
04 Jun 2023 21:13:47,661 INFO : User dkueltz@ucdavis.edu is already a member of group Panorama Public Submitters
04 Jun 2023 21:13:47,661 INFO : User dkueltz@ucdavis.edu is already a member of group Panorama Public Submitters
04 Jun 2023 21:13:47,667 INFO : Updating the 'Raw Data' tab configuration
04 Jun 2023 21:13:47,670 INFO : Updating dataFileUrls for run EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama_2023-02-28_23-19-48.sky.zip; targetedms run ID 163002
04 Jun 2023 21:13:47,672 INFO : Updating dataFileUrl...
04 Jun 2023 21:13:47,672 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/Kueltz%20Lab%20UCDavis%20-%20EAM_chap3_04cb1bb2-e57d-103b-82c0-fea6ddf5f252/_temp__2023-06-04_20-16-18/export/xar/experiments_and_runs.xar.exploded/Run152046/EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama_2023-02-28_23-19-48/EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama.skyd
04 Jun 2023 21:13:47,672 INFO : to: file:///data/labkey/files/Panorama%20Public/2023/Kueltz%20Lab%20UCDavis%20-%20EAM_chap3/@files/EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama_2023-02-28_23-19-48/EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama.skyd
04 Jun 2023 21:13:47,675 INFO : Updating dataFileUrl...
04 Jun 2023 21:13:47,675 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/Kueltz%20Lab%20UCDavis%20-%20EAM_chap3_04cb1bb2-e57d-103b-82c0-fea6ddf5f252/_temp__2023-06-04_20-16-18/export/xar/experiments_and_runs.xar.exploded/Run152046/EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama_2023-02-28_23-19-48.sky.zip
04 Jun 2023 21:13:47,675 INFO : to: file:///data/labkey/files/Panorama%20Public/2023/Kueltz%20Lab%20UCDavis%20-%20EAM_chap3/@files/EAM0046_Oremo-Gill_Histones_V8E_elib_Panorama_2023-02-28_23-19-48.sky.zip
04 Jun 2023 21:13:47,677 INFO : Updating dataFileUrls for run EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama_2023-02-28_23-31-11.sky.zip; targetedms run ID 163004
04 Jun 2023 21:13:47,679 INFO : Updating dataFileUrl...
04 Jun 2023 21:13:47,679 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/Kueltz%20Lab%20UCDavis%20-%20EAM_chap3_04cb1bb2-e57d-103b-82c0-fea6ddf5f252/_temp__2023-06-04_20-16-18/export/xar/experiments_and_runs.xar.exploded/Run152048/EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama_2023-02-28_23-31-11.sky.zip
04 Jun 2023 21:13:47,679 INFO : to: file:///data/labkey/files/Panorama%20Public/2023/Kueltz%20Lab%20UCDavis%20-%20EAM_chap3/@files/EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama_2023-02-28_23-31-11.sky.zip
04 Jun 2023 21:13:47,682 INFO : Updating dataFileUrl...
04 Jun 2023 21:13:47,682 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/Kueltz%20Lab%20UCDavis%20-%20EAM_chap3_04cb1bb2-e57d-103b-82c0-fea6ddf5f252/_temp__2023-06-04_20-16-18/export/xar/experiments_and_runs.xar.exploded/Run152048/EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama_2023-02-28_23-31-11/EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama.skyd
04 Jun 2023 21:13:47,682 INFO : to: file:///data/labkey/files/Panorama%20Public/2023/Kueltz%20Lab%20UCDavis%20-%20EAM_chap3/@files/EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama_2023-02-28_23-31-11/EAM0047_Oremo-Gill_Histones_V8DE_elib_Panorama.skyd
04 Jun 2023 21:13:47,690 INFO : Making folder public.
04 Jun 2023 21:13:47,697 INFO : Hiding the Data Pipeline tab.
04 Jun 2023 21:13:47,701 INFO : Updating Submission. Setting copiedExperimentId to 1624
04 Jun 2023 21:13:47,763 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask'