03 Sep 2021 17:43:21,035 INFO : Copying experiment "Ocular proteomic and transcriptomic changes with aging in response to lensectomy in a rabbit model of lensectomy with intraocular lens insertion" from folder /Medical College of Wisconsin - Kassem Lab/Ocular proteins in an aging rabbit model of lensectomy to /Panorama Public/2021/MCW Kassem Lab - Ocular proteins in an aging rabbit model of lensectomy
03 Sep 2021 17:43:21,035 INFO : =======================================
03 Sep 2021 17:43:21,244 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask' at location 'webserver-high-priority'
03 Sep 2021 17:43:21,245 INFO : 
03 Sep 2021 17:43:21,245 INFO : Exporting experiment.
03 Sep 2021 18:15:14,709 INFO : 
03 Sep 2021 18:15:14,709 INFO : Experiment export completed successfully.
03 Sep 2021 18:15:14,710 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask'
03 Sep 2021 18:15:14,791 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask' at location 'webserver-high-priority'
03 Sep 2021 18:15:14,792 INFO : 
03 Sep 2021 18:15:14,792 INFO : Importing experiment.
03 Sep 2021 18:15:14,801 INFO : Loading folder properties (folder type, settings and active modules)
03 Sep 2021 18:15:14,902 INFO : Done importing folder properties (folder type, settings and active modules)
03 Sep 2021 18:15:14,905 INFO : Loading etl definitions
03 Sep 2021 18:15:14,908 INFO : Loading wikis
03 Sep 2021 18:15:14,911 INFO : 0 wikis imported
03 Sep 2021 18:15:14,911 INFO : Done importing wikis
03 Sep 2021 18:15:14,912 INFO : Starting to copy files
03 Sep 2021 18:17:18,881 INFO : 6 files copied, now copying 1005_Porter_171222_Ps011_31873_POD3_DDA3.raw
03 Sep 2021 18:19:24,672 INFO : 15 files copied, now copying 2061_Porter_201027_Ts018_blank_01a.raw
03 Sep 2021 18:21:34,457 INFO : 23 files copied, now copying 1005_Porter_171222_Ps011_31888_Pre_DDA3.raw
03 Sep 2021 18:23:39,482 INFO : 35 files copied, now copying 1005_Porter_171222_Ps011_31872_Pre_DDA1.raw
03 Sep 2021 18:25:50,106 INFO : 50 files copied, now copying 1005_Porter_171222_Ps011_31865_Pre_DDA3.raw
03 Sep 2021 18:27:50,721 INFO : 71 files copied, now copying 1005_Porter_171222_Ps011_31865_POD3_DDA1.raw
03 Sep 2021 18:29:54,017 INFO : 86 files copied, now copying 2061_Porter_201027_Ts018_19-32217POD3_01.raw
03 Sep 2021 18:32:05,569 INFO : 104 files copied, now copying 1005_Porter_171222_Ps011_31895_POD3_DDA1_IC.raw
03 Sep 2021 18:34:06,572 INFO : 125 files copied, now copying 1005_Porter_171222_Ps011_31893_POD3_DDA3.raw
03 Sep 2021 18:36:14,488 INFO : 141 files copied, now copying 2061_Porter_201027_Ts018_2-32213Pre_02.raw
03 Sep 2021 18:38:15,919 INFO : 158 files copied, now copying 2061_Porter_201027_Ts018_blank_01d.raw
03 Sep 2021 18:40:29,756 INFO : 178 files copied, now copying 1005_Porter_171222_Ps011_31881_Pre_DDA2.raw
03 Sep 2021 18:42:47,788 INFO : 198 files copied, now copying 1005_Porter_171222_Ps011_31880_POD3_DDA3.raw
03 Sep 2021 18:44:48,288 INFO : 217 files copied, now copying 1005_Porter_171222_Ps011_31896_Pre_DDA2.raw
03 Sep 2021 18:46:00,146 INFO : 224 files copied, now copying 1005_DDA_Library.blib
03 Sep 2021 18:46:30,032 INFO : Copied 230 files
03 Sep 2021 18:46:30,032 INFO : Ensuring exp.data rows exist for imported files
03 Sep 2021 18:46:37,895 INFO : Starting Sample Type and Data Class import
03 Sep 2021 18:46:37,896 INFO : No types XAR file to process.
03 Sep 2021 18:46:37,896 INFO : Finished importing Sample Types and Data Classes
03 Sep 2021 18:46:37,898 INFO : Loading xar
03 Sep 2021 18:47:00,119 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-9055:TargetedMS.ImportSkyZip'
03 Sep 2021 18:47:00,122 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-9055:TargetedMS.ImportSkyZip.Core'
03 Sep 2021 18:47:00,125 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-9055:TargetedMS.ImportSkyZip.Output'
03 Sep 2021 18:47:00,125 DEBUG: Protocol import complete
03 Sep 2021 18:47:00,126 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-9055:Ocular+proteomic+and+transcriptomic+changes+with+aging+in+response+to+lensectomy+in+a+rabbit+model+of+lensectomy+with+intraocular+lens+insertion'
03 Sep 2021 18:47:00,127 DEBUG: Experiment/Run group import complete
03 Sep 2021 18:47:00,136 DEBUG: Protocol action set import complete
03 Sep 2021 18:47:00,155 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9055:TargetedMS.ImportSkyZip'
03 Sep 2021 18:47:00,165 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-9055:0716cc83-af7b-1039-be5b-fea6ddf5138a'
03 Sep 2021 18:47:00,170 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-9055:c21f373d-af78-1039-be5b-fea6ddf5138a'
03 Sep 2021 18:47:00,170 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9055:TargetedMS.ImportSkyZip.Core'
03 Sep 2021 18:47:00,173 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9055:TargetedMS.ImportSkyZip.Output'
03 Sep 2021 18:47:00,174 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-9055:0716cd59-af7b-1039-be5b-fea6ddf5138a'
03 Sep 2021 18:47:00,176 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/MCW%20Kassem%20Lab%20-%20Ocular%20proteins%20in%20an%20aging%20rabbit%20model%20of%20lensectomy_3c7d839e-ef46-1039-a2b1-fea6ddf522ee/_temp__2021-09-03_17-43-20/export/xar/experiments_and_runs.xar.exploded/Run111463/Aging_Run_1_Analysis_Use_no_precursor_32247_Removed_2021-06-14_15-09-39/Aging_Run_1_Analysis_Use_no_precursor_32247_Removed.skyd into the system
03 Sep 2021 18:47:00,176 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/MCW%20Kassem%20Lab%20-%20Ocular%20proteins%20in%20an%20aging%20rabbit%20model%20of%20lensectomy_3c7d839e-ef46-1039-a2b1-fea6ddf522ee/_temp__2021-09-03_17-43-20/export/xar/experiments_and_runs.xar.exploded/Run111463/Aging_Run_1_Analysis_Use_no_precursor_32247_Removed_2021-06-14_15-09-39/Aging_Run_1_Analysis_Use_no_precursor_32247_Removed.skyd into the system
03 Sep 2021 18:47:00,176 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/MCW%20Kassem%20Lab%20-%20Ocular%20proteins%20in%20an%20aging%20rabbit%20model%20of%20lensectomy_3c7d839e-ef46-1039-a2b1-fea6ddf522ee/_temp__2021-09-03_17-43-20/export/xar/experiments_and_runs.xar.exploded/Run111463/Aging_Run_1_Analysis_Use_no_precursor_32247_Removed_2021-06-14_15-09-39.sky.zip into the system
03 Sep 2021 18:47:00,178 INFO : Starting import from Aging_Run_1_Analysis_Use_no_precursor_32247_Removed_2021-06-14_15-09-39.sky.zip
03 Sep 2021 18:47:00,183 INFO : Starting to import Skyline document from Aging_Run_1_Analysis_Use_no_precursor_32247_Removed_2021-06-14_15-09-39.sky.zip
03 Sep 2021 18:47:00,470 INFO : Expanding Rabbit_Background.protdb
03 Sep 2021 18:47:02,486 INFO : Expanding 1005_DDA_Library.blib
03 Sep 2021 18:47:02,931 INFO : Expanding 1005_DDA_Library.redundant.blib
03 Sep 2021 18:47:15,490 INFO : Expanding Aging_Run_1_Analysis_Use_no_precursor_32247_Removed.skyd
03 Sep 2021 18:47:24,196 INFO : Expanding Aging_Run_1_Analysis_Use_no_precursor_32247_Removed.sky.view
03 Sep 2021 18:47:24,197 INFO : Expanding Aging_Run_1_Analysis_Use_no_precursor_32247_Removed.sky
03 Sep 2021 18:47:24,332 INFO : 1% Done
03 Sep 2021 18:47:26,064 DEBUG: Starting to load chromatogram headers
03 Sep 2021 18:47:26,103 DEBUG: Done loading chromatogram headers
03 Sep 2021 18:47:26,264 INFO : Inserting tr|G1SNT3|G1SNT3_RABIT
03 Sep 2021 18:47:26,283 INFO : 2% Done
03 Sep 2021 18:47:26,444 INFO : 3% Done
03 Sep 2021 18:47:26,517 INFO : 4% Done
03 Sep 2021 18:47:26,578 DEBUG: Total peptides inserted: 4
03 Sep 2021 18:47:26,583 INFO : Inserting tr|G1SSQ6|G1SSQ6_RABIT
03 Sep 2021 18:47:26,599 INFO : 5% Done
03 Sep 2021 18:47:26,681 INFO : 6% Done
03 Sep 2021 18:47:26,741 DEBUG: Total peptides inserted: 2
03 Sep 2021 18:47:26,746 INFO : Inserting tr|G1SUE4|G1SUE4_RABIT
03 Sep 2021 18:47:26,813 INFO : 7% Done
03 Sep 2021 18:47:26,894 INFO : 8% Done
03 Sep 2021 18:47:26,956 DEBUG: Total peptides inserted: 3
03 Sep 2021 18:47:26,962 INFO : Inserting tr|G1SEL4|G1SEL4_RABIT
03 Sep 2021 18:47:26,978 INFO : 9% Done
03 Sep 2021 18:47:27,029 DEBUG: Total peptides inserted: 1
03 Sep 2021 18:47:27,033 INFO : Inserting tr|G1T1Z5|G1T1Z5_RABIT
03 Sep 2021 18:47:27,046 INFO : 10% Done
03 Sep 2021 18:47:27,170 DEBUG: Total peptides inserted: 2
03 Sep 2021 18:47:27,174 INFO : Inserting tr|G1SHH2|G1SHH2_RABIT
03 Sep 2021 18:47:27,185 INFO : 11% Done
03 Sep 2021 18:47:27,246 INFO : 12% Done
03 Sep 2021 18:47:27,344 INFO : 14% Done
03 Sep 2021 18:47:27,400 DEBUG: Total peptides inserted: 4
03 Sep 2021 18:47:27,405 INFO : Inserting tr|G1SKM9|G1SKM9_RABIT
03 Sep 2021 18:47:27,481 INFO : 15% Done
03 Sep 2021 18:47:27,541 INFO : 16% Done
03 Sep 2021 18:47:27,579 DEBUG: Total peptides inserted: 3
03 Sep 2021 18:47:27,583 INFO : Inserting tr|G1SQG6|G1SQG6_RABIT
03 Sep 2021 18:47:27,596 INFO : 17% Done
03 Sep 2021 18:47:27,660 INFO : 18% Done
03 Sep 2021 18:47:27,791 DEBUG: Total peptides inserted: 4
03 Sep 2021 18:47:27,794 INFO : Inserting tr|G1T8T3|G1T8T3_RABIT
03 Sep 2021 18:47:27,805 INFO : 19% Done
03 Sep 2021 18:47:27,846 DEBUG: Total peptides inserted: 1
03 Sep 2021 18:47:27,849 INFO : Inserting tr|G1TKX3|G1TKX3_RABIT
03 Sep 2021 18:47:27,859 INFO : 20% Done
03 Sep 2021 18:47:27,910 INFO : 21% Done
03 Sep 2021 18:47:27,975 INFO : 22% Done
03 Sep 2021 18:47:28,088 DEBUG: Total peptides inserted: 4
03 Sep 2021 18:47:28,093 INFO : Inserting tr|G1T0X2|G1T0X2_RABIT
03 Sep 2021 18:47:28,105 INFO : 23% Done
03 Sep 2021 18:47:28,164 INFO : 24% Done
03 Sep 2021 18:47:28,226 INFO : 25% Done
03 Sep 2021 18:47:28,292 INFO : 26% Done
03 Sep 2021 18:47:28,392 DEBUG: Total peptides inserted: 5
03 Sep 2021 18:47:28,400 INFO : Inserting sp|P27170|PON1_RABIT
03 Sep 2021 18:47:28,410 INFO : 27% Done
03 Sep 2021 18:47:28,462 INFO : 29% Done
03 Sep 2021 18:47:28,521 INFO : 30% Done
03 Sep 2021 18:47:28,565 DEBUG: Total peptides inserted: 3
03 Sep 2021 18:47:28,572 INFO : Inserting tr|G1T5S0|G1T5S0_RABIT
03 Sep 2021 18:47:28,675 INFO : 31% Done
03 Sep 2021 18:47:28,717 DEBUG: Total peptides inserted: 3
03 Sep 2021 18:47:28,722 INFO : Inserting tr|Q45GR2|Q45GR2_RABIT
03 Sep 2021 18:47:28,735 INFO : 32% Done
03 Sep 2021 18:47:28,798 INFO : 33% Done
03 Sep 2021 18:47:28,850 INFO : 34% Done
03 Sep 2021 18:47:28,931 DEBUG: Total peptides inserted: 4
03 Sep 2021 18:47:28,935 INFO : Inserting tr|G1SQ70|G1SQ70_RABIT
03 Sep 2021 18:47:28,948 INFO : 35% Done
03 Sep 2021 18:47:29,013 INFO : 36% Done
03 Sep 2021 18:47:29,071 INFO : 37% Done
03 Sep 2021 18:47:29,125 INFO : 38% Done
03 Sep 2021 18:47:29,174 DEBUG: Total peptides inserted: 4
03 Sep 2021 18:47:29,181 INFO : Inserting tr|G1TZV1|G1TZV1_RABIT
03 Sep 2021 18:47:29,234 INFO : 39% Done
03 Sep 2021 18:47:29,278 INFO : 40% Done
03 Sep 2021 18:47:29,319 DEBUG: Total peptides inserted: 3
03 Sep 2021 18:47:29,322 INFO : Inserting tr|G1T7H9|G1T7H9_RABIT
03 Sep 2021 18:47:29,331 INFO : 41% Done
03 Sep 2021 18:47:29,420 INFO : 42% Done
03 Sep 2021 18:47:29,457 DEBUG: Total peptides inserted: 3
03 Sep 2021 18:47:29,460 INFO : Inserting tr|G1SPF9|G1SPF9_RABIT
03 Sep 2021 18:47:29,511 INFO : 43% Done
03 Sep 2021 18:47:29,560 INFO : 44% Done
03 Sep 2021 18:47:29,613 INFO : 45% Done
03 Sep 2021 18:47:29,672 INFO : 46% Done
03 Sep 2021 18:47:29,722 DEBUG: Total peptides inserted: 5
03 Sep 2021 18:47:29,726 INFO : Inserting sp|P18287|APOE_RABIT
03 Sep 2021 18:47:29,794 INFO : 47% Done
03 Sep 2021 18:47:29,847 INFO : 48% Done
03 Sep 2021 18:47:29,904 INFO : 49% Done
03 Sep 2021 18:47:29,937 DEBUG: Total peptides inserted: 4
03 Sep 2021 18:47:29,941 INFO : Inserting tr|G1SYK4|G1SYK4_RABIT
03 Sep 2021 18:47:29,952 INFO : 50% Done
03 Sep 2021 18:47:30,100 INFO : 51% Done
03 Sep 2021 18:47:30,152 DEBUG: Total peptides inserted: 4
03 Sep 2021 18:47:30,155 INFO : 52% Done
03 Sep 2021 18:47:30,160 INFO : Inserting tr|G1U6T0|G1U6T0_RABIT
03 Sep 2021 18:47:30,173 INFO : 53% Done
03 Sep 2021 18:47:30,240 INFO : 54% Done
03 Sep 2021 18:47:30,291 DEBUG: Total peptides inserted: 2
03 Sep 2021 18:47:30,294 INFO : Inserting tr|G1T127|G1T127_RABIT
03 Sep 2021 18:47:30,371 INFO : 55% Done
03 Sep 2021 18:47:30,428 INFO : 56% Done
03 Sep 2021 18:47:30,475 INFO : 57% Done
03 Sep 2021 18:47:30,521 DEBUG: Total peptides inserted: 4
03 Sep 2021 18:47:30,524 INFO : Inserting tr|G1SWV4|G1SWV4_RABIT
03 Sep 2021 18:47:30,532 INFO : 58% Done
03 Sep 2021 18:47:30,656 DEBUG: Total peptides inserted: 3
03 Sep 2021 18:47:30,659 INFO : Inserting tr|G1SP97|G1SP97_RABIT
03 Sep 2021 18:47:30,671 INFO : 59% Done
03 Sep 2021 18:47:30,726 INFO : 60% Done
03 Sep 2021 18:47:30,771 DEBUG: Total peptides inserted: 2
03 Sep 2021 18:47:30,774 INFO : Inserting tr|G1SIK0|G1SIK0_RABIT
03 Sep 2021 18:47:30,783 INFO : 61% Done
03 Sep 2021 18:47:30,840 INFO : 62% Done
03 Sep 2021 18:47:30,938 INFO : 63% Done
03 Sep 2021 18:47:30,983 DEBUG: Total peptides inserted: 4
03 Sep 2021 18:47:30,987 INFO : Inserting tr|G1TB36|G1TB36_RABIT
03 Sep 2021 18:47:31,000 INFO : 64% Done
03 Sep 2021 18:47:31,066 INFO : 65% Done
03 Sep 2021 18:47:31,153 INFO : 66% Done
03 Sep 2021 18:47:31,193 DEBUG: Total peptides inserted: 4
03 Sep 2021 18:47:31,197 INFO : Inserting tr|G1T0W8|G1T0W8_RABIT
03 Sep 2021 18:47:31,259 INFO : 67% Done
03 Sep 2021 18:47:31,311 INFO : 68% Done
03 Sep 2021 18:47:31,359 INFO : 69% Done
03 Sep 2021 18:47:31,414 INFO : 70% Done
03 Sep 2021 18:47:31,465 DEBUG: Total peptides inserted: 5
03 Sep 2021 18:47:31,469 INFO : Inserting tr|G1TD13|G1TD13_RABIT
03 Sep 2021 18:47:31,540 INFO : 71% Done
03 Sep 2021 18:47:31,578 DEBUG: Total peptides inserted: 2
03 Sep 2021 18:47:31,582 INFO : Inserting tr|G1U6I7|G1U6I7_RABIT
03 Sep 2021 18:47:31,593 INFO : 72% Done
03 Sep 2021 18:47:31,649 INFO : 73% Done
03 Sep 2021 18:47:31,695 INFO : 74% Done
03 Sep 2021 18:47:31,754 DEBUG: Total peptides inserted: 3
03 Sep 2021 18:47:31,758 INFO : Inserting tr|G1TBS8|G1TBS8_RABIT
03 Sep 2021 18:47:31,831 INFO : 75% Done
03 Sep 2021 18:47:31,881 INFO : 76% Done
03 Sep 2021 18:47:31,926 INFO : 77% Done
03 Sep 2021 18:47:31,976 DEBUG: Total peptides inserted: 4
03 Sep 2021 18:47:31,979 INFO : Inserting tr|G1T7A2|G1T7A2_RABIT
03 Sep 2021 18:47:31,994 INFO : 78% Done
03 Sep 2021 18:47:32,110 INFO : 79% Done
03 Sep 2021 18:47:32,167 INFO : 80% Done
03 Sep 2021 18:47:32,208 DEBUG: Total peptides inserted: 4
03 Sep 2021 18:47:32,209 INFO : Done parsing Skyline document.
03 Sep 2021 18:47:32,225 INFO : Calculating fold changes
03 Sep 2021 18:47:32,226 DEBUG: Calculating fold change for group comparison Treatment, 1 of 1
03 Sep 2021 18:47:34,751 INFO : 98% Done
03 Sep 2021 18:47:34,751 INFO : Done calculating fold changes.
03 Sep 2021 18:47:34,752 INFO : Creating and populating temp tables for Proportion values
03 Sep 2021 18:47:34,800 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
03 Sep 2021 18:47:35,041 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
03 Sep 2021 18:47:35,222 INFO : Cleaning up temp tables
03 Sep 2021 18:47:35,559 INFO : Completed import of Skyline document from Aging_Run_1_Analysis_Use_no_precursor_32247_Removed_2021-06-14_15-09-39.sky.zip
03 Sep 2021 18:47:35,562 INFO : 100% Done
03 Sep 2021 18:47:35,568 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/MCW%20Kassem%20Lab%20-%20Ocular%20proteins%20in%20an%20aging%20rabbit%20model%20of%20lensectomy_3c7d839e-ef46-1039-a2b1-fea6ddf522ee/_temp__2021-09-03_17-43-20/export/xar/experiments_and_runs.xar.exploded/Run111463/Aging_Run_1_Analysis_Use_no_precursor_32247_Removed_2021-06-14_15-09-39.sky.zip into the system
03 Sep 2021 18:47:35,576 INFO : Done importing xar
03 Sep 2021 18:47:35,578 INFO : Loading pages and webpart properties
03 Sep 2021 18:47:35,659 INFO : Done importing pages and webpart properties
03 Sep 2021 18:47:35,660 INFO : 
03 Sep 2021 18:47:35,660 INFO : Experiment import completed successfully.
03 Sep 2021 18:47:35,660 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask'
03 Sep 2021 18:47:35,905 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'
03 Sep 2021 18:47:35,905 INFO : 
03 Sep 2021 18:47:35,906 INFO : Finishing up experiment copy.
03 Sep 2021 18:47:35,909 INFO : Creating a new TargetedMS experiment entry in panoramapublic.ExperimentAnnotations.
03 Sep 2021 18:47:35,925 INFO : Assigning a ProteomeXchange ID.
03 Sep 2021 18:47:37,105 INFO : Assigning a DOI.
03 Sep 2021 18:47:38,051 INFO : Assigned DOI: 10.6069/h9dg-fe61
03 Sep 2021 18:47:38,055 INFO : Updating access URL to point to the new copy of the data.
03 Sep 2021 18:47:38,061 INFO : Setting the 'copied' timestamp and journalExperimentId on the JournalExperiment table.
03 Sep 2021 18:47:38,062 INFO : Removing copy permissions given to journal.
03 Sep 2021 18:47:38,085 INFO : Adding read permissions to all users that are folder admins in the source container.
03 Sep 2021 18:47:38,098 INFO : Setting the TargetedMS folder type to 'Experimental Data'
03 Sep 2021 18:47:38,105 INFO : Updating the 'Raw Data' tab configuration
03 Sep 2021 18:47:47,750 INFO : Updating dataFileUrls for run Aging_Run_1_Analysis_Use_no_precursor_32247_Removed_2021-06-14_15-09-39.sky.zip; targetedms run ID 119358
03 Sep 2021 18:47:47,751 INFO : Updating dataFileUrl...
03 Sep 2021 18:47:47,751 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/MCW%20Kassem%20Lab%20-%20Ocular%20proteins%20in%20an%20aging%20rabbit%20model%20of%20lensectomy_3c7d839e-ef46-1039-a2b1-fea6ddf522ee/_temp__2021-09-03_17-43-20/export/xar/experiments_and_runs.xar.exploded/Run111463/Aging_Run_1_Analysis_Use_no_precursor_32247_Removed_2021-06-14_15-09-39.sky.zip
03 Sep 2021 18:47:47,751 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/MCW%20Kassem%20Lab%20-%20Ocular%20proteins%20in%20an%20aging%20rabbit%20model%20of%20lensectomy/@files/Aging_Run_1_Analysis_Use_no_precursor_32247_Removed_2021-06-14_15-09-39.sky.zip
03 Sep 2021 18:47:47,754 INFO : Updating dataFileUrl...
03 Sep 2021 18:47:47,755 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/MCW%20Kassem%20Lab%20-%20Ocular%20proteins%20in%20an%20aging%20rabbit%20model%20of%20lensectomy_3c7d839e-ef46-1039-a2b1-fea6ddf522ee/_temp__2021-09-03_17-43-20/export/xar/experiments_and_runs.xar.exploded/Run111463/Aging_Run_1_Analysis_Use_no_precursor_32247_Removed_2021-06-14_15-09-39/Aging_Run_1_Analysis_Use_no_precursor_32247_Removed.skyd
03 Sep 2021 18:47:47,755 INFO : to: file:///data/labkey/files/Panorama%20Public/2021/MCW%20Kassem%20Lab%20-%20Ocular%20proteins%20in%20an%20aging%20rabbit%20model%20of%20lensectomy/@files/Aging_Run_1_Analysis_Use_no_precursor_32247_Removed_2021-06-14_15-09-39/Aging_Run_1_Analysis_Use_no_precursor_32247_Removed.skyd
03 Sep 2021 18:47:47,758 INFO : Making folder public.
03 Sep 2021 18:47:47,770 INFO : Hiding the Data Pipeline tab.
03 Sep 2021 18:47:47,963 INFO : Emailing submitter.
03 Sep 2021 18:47:48,156 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask'