Validating data for experiment Id: 1319, validation Id: 61: /Panorama Public/2021/IIT Bombay Proteomics

Validating data for experiment Id: 1319, validation Id: 61

IIT Bombay Proteomics - SRM_Rohu_LiverAH

Job Status

Created:

2022-05-31 16:20:31

Modified:

2022-05-31 16:20:32

Email:

vsharma@uw.edu

Status:

COMPLETE

Info:

Description:

Validating data for experiment Id: 1319, validation Id: 61

File Path:

/data/labkey/files/Panorama Public/2021/IIT Bombay Proteomics - SRM_Rohu_LiverAH/@files/Experiment_Validation_1391_2022-05-31_16-20-30.log

Files:

Experiment_Validation_1391_2022-05-31_16-20-30.log

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Log File

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31 May 2022 16:20:31,724 INFO : Validating data for a ProteomeXchange submission.

31 May 2022 16:20:31,725 INFO : =======================================

31 May 2022 16:20:31,891 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask' at location 'webserver'

31 May 2022 16:20:31,892 INFO : Validating data for experiment Id: 1319, validation Id: 61

31 May 2022 16:20:31,947 INFO : Validating data for 1 Skyline documents in 1 folders

31 May 2022 16:20:32,002 INFO : Sample file validation for Skyline document: 30102021_SRM_Rohu_LiverAH_vs_Control_2021-10-30_15-50-53.sky.zip

31 May 2022 16:20:32,002 INFO :   Found all sample files.

31 May 2022 16:20:32,054 INFO : Modifications validation:

31 May 2022 16:20:32,054 INFO : VALID MODIFICATIONS:

31 May 2022 16:20:32,054 INFO : 235: Carbamidomethyl (C): UNIMOD:4 - Carbamidomethyl

31 May 2022 16:20:32,054 INFO :     30102021_SRM_Rohu_LiverAH_vs_Control_2021-10-30_15-50-53.sky.zip

31 May 2022 16:20:32,054 INFO : 236: Label:13C(6)15N(2) (C-term K):

31 May 2022 16:20:32,054 INFO :     30102021_SRM_Rohu_LiverAH_vs_Control_2021-10-30_15-50-53.sky.zip

31 May 2022 16:20:32,054 INFO : INVALID MODIFICATIONS (No Unimod ID):

31 May 2022 16:20:32,272 INFO : Spectral library validation:

31 May 2022 16:20:32,272 INFO : 'Liver_AH_LFQ_DDA' (Liver_AH_LFQ_DDA.blib) library in 1 Skyline documents was built with 10 raw files; 4 peptide Id files. Status: Missing spectrum and peptide Id  files.

31 May 2022 16:20:32,272 INFO :   MISSING FILES:

31 May 2022 16:20:32,272 INFO :     Spectrum File: 17062021_Fusion_MK_Liver_AH1

31 May 2022 16:20:32,272 INFO :     Spectrum File: 17062021_Fusion_MK_Liver_AH2

31 May 2022 16:20:32,272 INFO :     Spectrum File: 17062021_Fusion_MK_Liver_AH3

31 May 2022 16:20:32,272 INFO :     Spectrum File: 17062021_Fusion_MK_Liver_AH4

31 May 2022 16:20:32,272 INFO :     Spectrum File: 17062021_Fusion_MK_Liver_Control1

31 May 2022 16:20:32,272 INFO :     Spectrum File: 17062021_Fusion_MK_Liver_Control2

31 May 2022 16:20:32,272 INFO :     Spectrum File: 17062021_Fusion_MK_Liver_Control3

31 May 2022 16:20:32,272 INFO :     Spectrum File: 17062021_Fusion_MK_Liver_Control_4

31 May 2022 16:20:32,272 INFO :     Spectrum File: 17062021_Fusion_MK_Liver_QC_1

31 May 2022 16:20:32,272 INFO :     Spectrum File: 17062021_Fusion_MK_Liver_QC_2

31 May 2022 16:20:32,272 INFO :     Peptide Id File: Liver_AH_msms.txt

31 May 2022 16:20:32,272 INFO :     Peptide Id File: msms.txt

31 May 2022 16:20:32,272 INFO :     Peptide Id File: mqpar.xml

31 May 2022 16:20:32,272 INFO :     Peptide Id File: evidence.txt

31 May 2022 16:20:32,273 INFO : Data validation is complete. Status is IncompleteMetadata

31 May 2022 16:20:32,273 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask'