HER2_and_cellularity_23plex_breast_tumor_frozen_process_QC_for_Panorama_final_2020-10-15_08-23-52.sky.zip

Paulovich - HER2_cellularity_breast_cancer_tissue_frozen_FFPE_immunoMRM
HER2_and_cellularity_23plex_breast_tumor_frozen_process_QC_for_Panorama_final_2020-10-15_08-23-52.sky.zip   1 version
 
15 proteins, 23 peptides, 46 precursors, 210 transitions  -  49 replicates  -  Skyline-daily (64-bit) 20.2.1.286 (1d4420f7a)
Protein Note/Annotations
 
sp|P35555|FBN1_HUMANFibrillin-1 OS=Homo sapiens GN=FBN1 PE=1 SV=3
Peptide Note/Annotations
Precursor Note/Annotations
YEDEECTLPIAGR
Heavy SIS source: pure
PeptideConcentrationIS: 800
01551.6875 
YEDEECTLPIAGR
light2+776.85101551.6875535.557390.0000
YEDEECTLPIAGR
Heavy SIS source: pure
PeptideConcentrationIS: 800
01551.6875 
YEDEECTLPIAGR
heavy2+781.85521561.6958535.557390.0000
SGNCYLDIRPR
Heavy SIS source: pure
PeptideConcentrationIS: 800
01349.6510 
SGNCYLDIRPR
light3+450.89091349.6510518.915590.0000
SGNCYLDIRPR
Heavy SIS source: pure
PeptideConcentrationIS: 800
01349.6510 
SGNCYLDIRPR
heavy3+454.22701359.6593518.915590.0000
TCVDINECLLEPR
Heavy SIS source: pure
PeptideConcentrationIS: 800
01617.7491 
TCVDINECLLEPR
light2+809.88181617.7491537.159390.0000
TCVDINECLLEPR
Heavy SIS source: pure
PeptideConcentrationIS: 800
01617.7491 
TCVDINECLLEPR
heavy2+814.88591627.7573537.159390.0000
sp|Q96Q06|PLIN4_HUMANPerilipin-4 OS=Homo sapiens GN=PLIN4 PE=2 SV=2
Peptide Note/Annotations
Precursor Note/Annotations
VLSAEQGSYFVR
Heavy SIS source: pure
PeptideConcentrationIS: 80
01354.6881 
VLSAEQGSYFVR
light2+678.35131354.6881530.780090.0000
VLSAEQGSYFVR
Heavy SIS source: pure
PeptideConcentrationIS: 80
01354.6881 
VLSAEQGSYFVR
heavy2+683.35551364.6964530.780090.0000
AFEHAVSHLQHGQFQAR
Heavy SIS source: pure
PeptideConcentrationIS: 80
01961.9609 
AFEHAVSHLQHGQFQAR
light4+491.49751961.9609520.734790.0000
AFEHAVSHLQHGQFQAR
Heavy SIS source: pure
PeptideConcentrationIS: 80
01961.9609 
AFEHAVSHLQHGQFQAR
heavy4+493.99961971.9691520.734790.0000
sp|P08575|PTPRC_HUMANReceptor-type tyrosine-protein phosphatase C OS=Homo sapiens GN=PTPRC PE=1 SV=2
Peptide Note/Annotations
Precursor Note/Annotations
LFLAEFQSIPR
Heavy SIS source: pure
PeptideConcentrationIS: 80
01319.7238 
LFLAEFQSIPR
light2+660.86921319.7238529.932290.0000
LFLAEFQSIPR
Heavy SIS source: pure
PeptideConcentrationIS: 80
01319.7238 
LFLAEFQSIPR
heavy2+665.87331329.7320529.932290.0000
DPPSEPSPLEAEFQR
Heavy SIS source: pure
PeptideConcentrationIS: 80
01697.7897 
DPPSEPSPLEAEFQR
light2+849.90211697.7897539.100390.0000
DPPSEPSPLEAEFQR
Heavy SIS source: pure
PeptideConcentrationIS: 80
01697.7897 
DPPSEPSPLEAEFQR
heavy2+854.90621707.7979539.100390.0000
sp|P15090|FABP4_HUMANFatty acid-binding protein, adipocyte OS=Homo sapiens GN=FABP4 PE=1 SV=3
Peptide Note/Annotations
Precursor Note/Annotations
EVGVGFATR
Heavy SIS source: pure
PeptideConcentrationIS: 800
0934.4872 
EVGVGFATR
light2+468.2509934.4872520.590290.0000
EVGVGFATR
Heavy SIS source: pure
PeptideConcentrationIS: 800
0934.4872 
EVGVGFATR
heavy2+473.2550944.4955520.590290.0000
sp|P08729|K2C7_HUMANKeratin, type II cytoskeletal 7 OS=Homo sapiens GN=KRT7 PE=1 SV=5
Peptide Note/Annotations
Precursor Note/Annotations
SAYGGPVGAGIR
Heavy SIS source: pure
PeptideConcentrationIS: 800
01103.5724 
SAYGGPVGAGIR
light2+552.79351103.5724524.690590.0000
SAYGGPVGAGIR
Heavy SIS source: pure
PeptideConcentrationIS: 800
01103.5724 
SAYGGPVGAGIR
heavy2+557.79761113.5806524.690590.0000
LPDIFEAQIAGLR
Heavy SIS source: pure
PeptideConcentrationIS: 800
01441.7929 
LPDIFEAQIAGLR
light2+721.90371441.7929532.892390.0000
LPDIFEAQIAGLR
Heavy SIS source: pure
PeptideConcentrationIS: 800
01441.7929 
LPDIFEAQIAGLR
heavy2+726.90791451.8012532.892390.0000
sp|P13647|K2C5_HUMANKeratin, type II cytoskeletal 5 OS=Homo sapiens GN=KRT5 PE=1 SV=3
Peptide Note/Annotations
Precursor Note/Annotations
SFSTASAITPSVSR
Heavy SIS source: pure
PeptideConcentrationIS: 800
01409.7151 
SFSTASAITPSVSR
light2+705.86481409.7151532.114490.0000
SFSTASAITPSVSR
Heavy SIS source: pure
PeptideConcentrationIS: 800
01409.7151 
SFSTASAITPSVSR
heavy2+710.86891419.7233532.114490.0000
AQYEEIANR
Heavy SIS source: crude
PeptideConcentrationIS: 800
01092.5200 
AQYEEIANR
light2+547.26731092.5200524.422590.0000
AQYEEIANR
Heavy SIS source: crude
PeptideConcentrationIS: 800
01092.5200 
AQYEEIANR
heavy2+552.27141102.5283524.422590.0000
sp|P13611|CSPG2_HUMANVersican core protein OS=Homo sapiens GN=VCAN PE=1 SV=3
Peptide Note/Annotations
Precursor Note/Annotations
VSVPTHPEAVGDASLTVVK
Heavy SIS source: pure
PeptideConcentrationIS: 800
01905.0207 
VSVPTHPEAVGDASLTVVK
light3+636.01421905.0207527.209090.0000
VSVPTHPEAVGDASLTVVK
Heavy SIS source: pure
PeptideConcentrationIS: 800
01905.0207 
VSVPTHPEAVGDASLTVVK
heavy3+638.68561913.0349527.209090.0000
sp|P04626|ERBB2_HUMANReceptor tyrosine-protein kinase erbB-2 OS=Homo sapiens GN=ERBB2 PE=1 SV=1
Peptide Note/Annotations
Precursor Note/Annotations
AVTSANIQEFAGCK
Heavy SIS source: pure
PeptideConcentrationIS: 8
01494.7137 
AVTSANIQEFAGCK
light2+748.36411494.7137534.175790.0000
AVTSANIQEFAGCK
Heavy SIS source: pure
PeptideConcentrationIS: 8
01494.7137 
AVTSANIQEFAGCK
heavy2+751.37421500.7338534.175790.0000
GLQSLPTHDPSPLQR
Heavy SIS source: pure
PeptideConcentrationIS: 80
01644.8584 
GLQSLPTHDPSPLQR
light3+549.29341644.8584423.323990.0000
GLQSLPTHDPSPLQR
Heavy SIS source: pure
PeptideConcentrationIS: 80
01644.8584 
GLQSLPTHDPSPLQR
heavy3+552.62951654.8666423.323990.0000
sp|P68871|HBB_HUMANHemoglobin subunit beta OS=Homo sapiens GN=HBB PE=1 SV=2
Peptide Note/Annotations
Precursor Note/Annotations
VNVDEVGGEALGR
Heavy SIS source: crude
PeptideConcentrationIS: 1600
01313.6575 
VNVDEVGGEALGR
light2+657.83601313.6575429.785090.0000
VNVDEVGGEALGR
Heavy SIS source: crude
PeptideConcentrationIS: 1600
01313.6575 
VNVDEVGGEALGR
heavy2+662.84021323.6658429.785090.0000
FFESFGDLSTPDAVMGNPK
Heavy SIS source: crude
PeptideConcentrationIS: 800
02057.9404 
FFESFGDLSTPDAVMGNPK
light3+686.98742057.9404429.492690.0000
FFESFGDLSTPDAVMGNPK
Heavy SIS source: crude
PeptideConcentrationIS: 800
02057.9404 
FFESFGDLSTPDAVMGNPK
heavy3+689.65882065.9546429.492690.0000
sp|P16284|PECA1_HUMANPlatelet endothelial cell adhesion molecule OS=Homo sapiens GN=PECAM1 PE=1 SV=1
Peptide Note/Annotations
Precursor Note/Annotations
DQNFVILEFPVEEQDR
Heavy SIS source: crude
PeptideConcentrationIS: 800
01976.9480 
DQNFVILEFPVEEQDR
light3+659.98991976.9480428.283190.0000
DQNFVILEFPVEEQDR
Heavy SIS source: crude
PeptideConcentrationIS: 800
01976.9480 
DQNFVILEFPVEEQDR
heavy3+663.32601986.9562428.283190.0000