21 Mar 2018 09:13:39,190 INFO : Copying experiment "Serum glycoprotein biomarker validation for esophageal adenocarcinoma - Ochsner cohort dataset" from folder /QIMRBerghofer Medical Research Institute/Hill Group/EAC LeMBA Validation Ochsner Cohort to /Panorama Public/2018/QIMR Berghofer - EAC LeMBA Validation Ochsner Cohort 21 Mar 2018 09:13:39,190 INFO : ======================================= 21 Mar 2018 09:13:39,281 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentExportTask' at location 'webserver' 21 Mar 2018 09:13:39,284 INFO : 21 Mar 2018 09:13:39,284 INFO : Exporting experiment. 21 Mar 2018 09:13:55,597 INFO : 21 Mar 2018 09:13:55,597 INFO : Experiment export completed successfully. 21 Mar 2018 09:13:55,597 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentExportTask' 21 Mar 2018 09:13:55,610 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentImportTask' at location 'webserver' 21 Mar 2018 09:13:55,610 INFO : 21 Mar 2018 09:13:55,610 INFO : Importing experiment. 21 Mar 2018 09:13:55,614 INFO : Loading folder properties (folder type, settings and active modules) 21 Mar 2018 09:13:55,783 INFO : Done importing folder properties (folder type, settings and active modules) 21 Mar 2018 09:13:55,788 INFO : Loading container specific module properties 21 Mar 2018 09:13:55,800 INFO : Done importing container specific module properties 21 Mar 2018 09:13:55,805 INFO : Loading xar 21 Mar 2018 09:13:57,921 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-3916:TargetedMS.ImportSkyZip' 21 Mar 2018 09:13:57,925 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-3916:TargetedMS.ImportSkyZip.Core' 21 Mar 2018 09:13:57,929 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-3916:TargetedMS.ImportSkyZip.Output' 21 Mar 2018 09:13:57,929 DEBUG: Protocol import complete 21 Mar 2018 09:13:57,971 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-3916:Serum+glycoprotein+biomarker+validation+for+esophageal+adenocarcinoma+-+Ochsner+cohort+dataset' 21 Mar 2018 09:13:57,971 DEBUG: Experiment/Run group import complete 21 Mar 2018 09:13:58,006 DEBUG: Protocol action set import complete 21 Mar 2018 09:13:58,045 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3916:TargetedMS.ImportSkyZip' 21 Mar 2018 09:13:58,152 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-3916:db9753d4-0b0e-1036-940b-3013bb9b1c47' 21 Mar 2018 09:13:58,152 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3916:TargetedMS.ImportSkyZip.Core' 21 Mar 2018 09:13:58,156 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3916:TargetedMS.ImportSkyZip.Output' 21 Mar 2018 09:13:58,157 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-3916:db9755d6-0b0e-1036-940b-3013bb9b1c47' 21 Mar 2018 09:13:58,164 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3916:TargetedMS.ImportSkyZip' 21 Mar 2018 09:13:58,186 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-3916:db975a63-0b0e-1036-940b-3013bb9b1c47' 21 Mar 2018 09:13:58,186 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3916:TargetedMS.ImportSkyZip.Core' 21 Mar 2018 09:13:58,189 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3916:TargetedMS.ImportSkyZip.Output' 21 Mar 2018 09:13:58,190 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-3916:db975fb2-0b0e-1036-940b-3013bb9b1c47' 21 Mar 2018 09:13:58,211 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3916:TargetedMS.ImportSkyZip' 21 Mar 2018 09:13:58,219 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-3916:db975add-0b0e-1036-940b-3013bb9b1c47' 21 Mar 2018 09:13:58,219 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3916:TargetedMS.ImportSkyZip.Core' 21 Mar 2018 09:13:58,221 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3916:TargetedMS.ImportSkyZip.Output' 21 Mar 2018 09:13:58,222 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-3916:db976398-0b0e-1036-940b-3013bb9b1c47' 21 Mar 2018 09:13:58,230 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3916:TargetedMS.ImportSkyZip' 21 Mar 2018 09:13:58,237 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-3916:db975be2-0b0e-1036-940b-3013bb9b1c47' 21 Mar 2018 09:13:58,237 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3916:TargetedMS.ImportSkyZip.Core' 21 Mar 2018 09:13:58,240 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3916:TargetedMS.ImportSkyZip.Output' 21 Mar 2018 09:13:58,240 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-3916:db97669a-0b0e-1036-940b-3013bb9b1c47' 21 Mar 2018 09:13:58,241 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2018/QIMR%20Berghofer%20-%20EAC%20LeMBA%20Validation%20Ochsner%20Cohort/@files/export/xar/experiments_and_runs.xar.exploded/Run28617/2.%20AAL_Unique%2020170614_2018-03-16_16-13-29.sky.zip into the system 21 Mar 2018 09:13:58,244 INFO : Starting import from 2. AAL_Unique 20170614_2018-03-16_16-13-29.sky.zip 21 Mar 2018 09:13:58,251 INFO : Starting to import Skyline document from 2. AAL_Unique 20170614_2018-03-16_16-13-29.sky.zip 21 Mar 2018 09:13:58,252 INFO : Expanding iRT-C18_20151012.irtdb 21 Mar 2018 09:13:58,252 INFO : Expanding LeMBA_Human.blib 21 Mar 2018 09:13:58,260 INFO : Expanding 2. AAL_Unique 20170614.skyd 21 Mar 2018 09:13:59,291 INFO : Expanding 2. AAL_Unique 20170614.sky.view 21 Mar 2018 09:13:59,291 INFO : Expanding 2. AAL_Unique 20170614.sky 21 Mar 2018 09:14:00,328 INFO : Inserting iRT 21 Mar 2018 09:14:09,475 INFO : Inserting O75636 21 Mar 2018 09:14:10,102 INFO : Inserting O75882 21 Mar 2018 09:14:10,719 INFO : Inserting O95445 21 Mar 2018 09:14:11,663 INFO : Inserting P00450 21 Mar 2018 09:14:13,047 INFO : Inserting P00734 21 Mar 2018 09:14:13,967 INFO : Inserting P00736 21 Mar 2018 09:14:15,199 INFO : Inserting P00738 21 Mar 2018 09:14:17,225 INFO : Inserting P00747 21 Mar 2018 09:14:18,732 INFO : Inserting P00748 21 Mar 2018 09:14:19,594 INFO : Inserting P00751 21 Mar 2018 09:14:20,957 INFO : Inserting P00918 21 Mar 2018 09:14:21,514 INFO : Inserting P01008 21 Mar 2018 09:14:22,647 INFO : Inserting P01009 21 Mar 2018 09:14:23,816 INFO : Inserting P01011 21 Mar 2018 09:14:25,640 INFO : Inserting P01012 21 Mar 2018 09:14:25,951 INFO : Inserting P01019 21 Mar 2018 09:14:26,961 INFO : Inserting P01023 21 Mar 2018 09:14:29,073 INFO : Inserting P01024 21 Mar 2018 09:14:30,124 INFO : Inserting P01031 21 Mar 2018 09:14:30,953 INFO : Inserting P01042 21 Mar 2018 09:14:32,415 INFO : Inserting P02647 21 Mar 2018 09:14:33,252 INFO : Inserting P02671 21 Mar 2018 09:14:34,033 INFO : Inserting P02675 21 Mar 2018 09:14:34,611 INFO : Inserting P02679 21 Mar 2018 09:14:35,263 INFO : Inserting P02730 21 Mar 2018 09:14:35,920 INFO : Inserting P02741 21 Mar 2018 09:14:36,501 INFO : Inserting P02745 21 Mar 2018 09:14:36,932 INFO : Inserting P02746 21 Mar 2018 09:14:37,466 INFO : Inserting P02747 21 Mar 2018 09:14:38,623 INFO : Inserting P02748 21 Mar 2018 09:14:40,821 INFO : Inserting P02749 21 Mar 2018 09:14:41,778 INFO : Inserting P02750 21 Mar 2018 09:14:42,397 INFO : Inserting P02751 21 Mar 2018 09:14:43,019 INFO : Inserting P02753 21 Mar 2018 09:14:43,649 INFO : Inserting P02760 21 Mar 2018 09:14:44,929 INFO : Inserting P02765 21 Mar 2018 09:14:45,764 INFO : Inserting P02774 21 Mar 2018 09:14:46,935 INFO : Inserting P02787 21 Mar 2018 09:14:48,339 INFO : Inserting P02790 21 Mar 2018 09:14:49,756 INFO : Inserting P03952 21 Mar 2018 09:14:50,311 INFO : Inserting P04003 21 Mar 2018 09:14:51,428 INFO : Inserting P04004 21 Mar 2018 09:14:51,990 INFO : Inserting P04114 21 Mar 2018 09:14:53,251 INFO : Inserting P04196 21 Mar 2018 09:14:54,397 INFO : Inserting P04217 21 Mar 2018 09:14:54,947 INFO : Inserting P05090 21 Mar 2018 09:14:55,518 INFO : Inserting P05155 21 Mar 2018 09:14:56,647 INFO : Inserting P05156 21 Mar 2018 09:14:58,044 INFO : Inserting P05546 21 Mar 2018 09:14:59,201 INFO : Inserting P06396 21 Mar 2018 09:15:01,020 INFO : Inserting P06681 21 Mar 2018 09:15:01,546 INFO : Inserting P07225 21 Mar 2018 09:15:02,156 INFO : Inserting P07357 21 Mar 2018 09:15:03,084 INFO : Inserting P07996 21 Mar 2018 09:15:03,921 INFO : Inserting P08185 21 Mar 2018 09:15:04,681 INFO : Inserting P08603 21 Mar 2018 09:15:05,262 INFO : Inserting P08697 21 Mar 2018 09:15:06,154 INFO : Inserting P09871 21 Mar 2018 09:15:06,997 INFO : Inserting P0C0L5 21 Mar 2018 09:15:08,781 INFO : Inserting P10643 21 Mar 2018 09:15:10,628 INFO : Inserting P10909 21 Mar 2018 09:15:11,773 INFO : Inserting P12259 21 Mar 2018 09:15:12,340 INFO : Inserting P13671 21 Mar 2018 09:15:13,491 INFO : Inserting P19652 21 Mar 2018 09:15:14,079 INFO : Inserting P19823 21 Mar 2018 09:15:15,476 INFO : Inserting P19827 21 Mar 2018 09:15:16,356 INFO : Inserting P20851 21 Mar 2018 09:15:16,916 INFO : Inserting P25311 21 Mar 2018 09:15:17,752 INFO : Inserting P27169 21 Mar 2018 09:15:18,882 INFO : Inserting P29622 21 Mar 2018 09:15:20,014 INFO : Inserting P32119 21 Mar 2018 09:15:20,517 INFO : Inserting P33151 21 Mar 2018 09:15:21,373 INFO : Inserting P33981 21 Mar 2018 09:15:21,930 INFO : Inserting P35542 21 Mar 2018 09:15:22,569 INFO : Inserting P35858 21 Mar 2018 09:15:23,469 INFO : Inserting P36955 21 Mar 2018 09:15:24,304 INFO : Inserting P43652 21 Mar 2018 09:15:25,672 INFO : Inserting P51884 21 Mar 2018 09:15:26,453 INFO : Inserting P55058 21 Mar 2018 09:15:27,349 INFO : Inserting P69905 21 Mar 2018 09:15:27,927 INFO : Inserting Q06033 21 Mar 2018 09:15:28,587 INFO : Inserting Q08380 21 Mar 2018 09:15:29,157 INFO : Inserting Q14520 21 Mar 2018 09:15:29,718 INFO : Inserting Q14624 21 Mar 2018 09:15:30,566 INFO : Inserting Q14966 21 Mar 2018 09:15:31,325 INFO : Inserting Q15166 21 Mar 2018 09:15:32,164 INFO : Inserting Q16610 21 Mar 2018 09:15:32,740 INFO : Inserting Q5T011 21 Mar 2018 09:15:33,307 INFO : Inserting Q7Z7A1 21 Mar 2018 09:15:33,896 INFO : Inserting Q96IY4 21 Mar 2018 09:15:34,770 INFO : Inserting Q96PD5 21 Mar 2018 09:15:35,350 INFO : Inserting Q9H8K7 21 Mar 2018 09:15:38,551 INFO : Completed import of Skyline document from 2. AAL_Unique 20170614_2018-03-16_16-13-29.sky.zip 21 Mar 2018 09:15:38,556 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2018/QIMR%20Berghofer%20-%20EAC%20LeMBA%20Validation%20Ochsner%20Cohort/@files/export/xar/experiments_and_runs.xar.exploded/Run28617/2.%20AAL_Unique%2020170614_2018-03-16_16-13-29.sky.zip into the system 21 Mar 2018 09:15:38,556 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2018/QIMR%20Berghofer%20-%20EAC%20LeMBA%20Validation%20Ochsner%20Cohort/@files/export/xar/experiments_and_runs.xar.exploded/Run28618/2.%20EPHA_Unique%2020170614_2018-03-16_16-22-13.sky.zip into the system 21 Mar 2018 09:15:38,558 INFO : Starting import from 2. EPHA_Unique 20170614_2018-03-16_16-22-13.sky.zip 21 Mar 2018 09:15:38,561 INFO : Starting to import Skyline document from 2. EPHA_Unique 20170614_2018-03-16_16-22-13.sky.zip 21 Mar 2018 09:15:38,561 INFO : Expanding iRT-C18_20151012.irtdb 21 Mar 2018 09:15:38,561 INFO : Expanding LeMBA_Human.blib 21 Mar 2018 09:15:38,569 INFO : Expanding 2. EPHA_Unique 20170614.skyd 21 Mar 2018 09:15:39,302 INFO : Expanding 2. EPHA_Unique 20170614.sky.view 21 Mar 2018 09:15:39,303 INFO : Expanding 2. EPHA_Unique 20170614.sky 21 Mar 2018 09:15:40,307 INFO : Inserting iRT 21 Mar 2018 09:15:47,447 INFO : Inserting O75636 21 Mar 2018 09:15:48,282 INFO : Inserting O75882 21 Mar 2018 09:15:48,852 INFO : Inserting O95445 21 Mar 2018 09:15:49,684 INFO : Inserting P00450 21 Mar 2018 09:15:50,830 INFO : Inserting P00734 21 Mar 2018 09:15:51,698 INFO : Inserting P00736 21 Mar 2018 09:15:52,872 INFO : Inserting P00738 21 Mar 2018 09:15:54,698 INFO : Inserting P00747 21 Mar 2018 09:15:56,117 INFO : Inserting P00748 21 Mar 2018 09:15:56,954 INFO : Inserting P00751 21 Mar 2018 09:15:58,295 INFO : Inserting P00918 21 Mar 2018 09:15:58,854 INFO : Inserting P01008 21 Mar 2018 09:15:59,972 INFO : Inserting P01009 21 Mar 2018 09:16:01,137 INFO : Inserting P01011 21 Mar 2018 09:16:03,145 INFO : Inserting P01012 21 Mar 2018 09:16:03,435 INFO : Inserting P01019 21 Mar 2018 09:16:04,447 INFO : Inserting P01023 21 Mar 2018 09:16:06,750 INFO : Inserting P01024 21 Mar 2018 09:16:07,851 INFO : Inserting P01031 21 Mar 2018 09:16:08,734 INFO : Inserting P01042 21 Mar 2018 09:16:10,092 INFO : Inserting P02647 21 Mar 2018 09:16:10,653 INFO : Inserting P02671 21 Mar 2018 09:16:11,456 INFO : Inserting P02675 21 Mar 2018 09:16:12,019 INFO : Inserting P02679 21 Mar 2018 09:16:12,657 INFO : Inserting P02730 21 Mar 2018 09:16:13,309 INFO : Inserting P02741 21 Mar 2018 09:16:13,963 INFO : Inserting P02745 21 Mar 2018 09:16:14,621 INFO : Inserting P02746 21 Mar 2018 09:16:15,568 INFO : Inserting P02747 21 Mar 2018 09:16:16,174 INFO : Inserting P02748 21 Mar 2018 09:16:18,140 INFO : Inserting P02749 21 Mar 2018 09:16:18,520 INFO : Inserting P02750 21 Mar 2018 09:16:18,767 INFO : Inserting P02751 21 Mar 2018 09:16:19,022 INFO : Inserting P02753 21 Mar 2018 09:16:19,278 INFO : Inserting P02760 21 Mar 2018 09:16:20,778 INFO : Inserting P02765 21 Mar 2018 09:16:21,693 INFO : Inserting P02774 21 Mar 2018 09:16:22,951 INFO : Inserting P02787 21 Mar 2018 09:16:24,112 INFO : Inserting P02790 21 Mar 2018 09:16:24,752 INFO : Inserting P03952 21 Mar 2018 09:16:25,017 INFO : Inserting P04003 21 Mar 2018 09:16:25,838 INFO : Inserting P04004 21 Mar 2018 09:16:26,385 INFO : Inserting P04114 21 Mar 2018 09:16:27,118 INFO : Inserting P04196 21 Mar 2018 09:16:28,281 INFO : Inserting P04217 21 Mar 2018 09:16:28,888 INFO : Inserting P05090 21 Mar 2018 09:16:29,500 INFO : Inserting P05155 21 Mar 2018 09:16:30,719 INFO : Inserting P05156 21 Mar 2018 09:16:32,259 INFO : Inserting P05546 21 Mar 2018 09:16:33,476 INFO : Inserting P06396 21 Mar 2018 09:16:35,480 INFO : Inserting P06681 21 Mar 2018 09:16:36,090 INFO : Inserting P07225 21 Mar 2018 09:16:36,699 INFO : Inserting P07357 21 Mar 2018 09:16:37,667 INFO : Inserting P07996 21 Mar 2018 09:16:38,596 INFO : Inserting P08185 21 Mar 2018 09:16:39,209 INFO : Inserting P08603 21 Mar 2018 09:16:39,824 INFO : Inserting P08697 21 Mar 2018 09:16:40,740 INFO : Inserting P09871 21 Mar 2018 09:16:41,653 INFO : Inserting P0C0L5 21 Mar 2018 09:16:43,576 INFO : Inserting P10643 21 Mar 2018 09:16:45,577 INFO : Inserting P10909 21 Mar 2018 09:16:46,802 INFO : Inserting P12259 21 Mar 2018 09:16:47,424 INFO : Inserting P13671 21 Mar 2018 09:16:48,642 INFO : Inserting P18428 21 Mar 2018 09:16:49,263 INFO : Inserting P19652 21 Mar 2018 09:16:49,882 INFO : Inserting P19823 21 Mar 2018 09:16:51,403 INFO : Inserting P19827 21 Mar 2018 09:16:52,313 INFO : Inserting P20851 21 Mar 2018 09:16:52,926 INFO : Inserting P27169 21 Mar 2018 09:16:54,144 INFO : Inserting P29622 21 Mar 2018 09:16:55,564 INFO : Inserting P32119 21 Mar 2018 09:16:56,117 INFO : Inserting P33151 21 Mar 2018 09:16:57,030 INFO : Inserting P33981 21 Mar 2018 09:16:57,634 INFO : Inserting P35858 21 Mar 2018 09:16:58,564 INFO : Inserting P36955 21 Mar 2018 09:16:59,130 INFO : Inserting P43652 21 Mar 2018 09:17:00,327 INFO : Inserting P51884 21 Mar 2018 09:17:01,147 INFO : Inserting P55058 21 Mar 2018 09:17:02,064 INFO : Inserting P69905 21 Mar 2018 09:17:02,621 INFO : Inserting Q06033 21 Mar 2018 09:17:03,224 INFO : Inserting Q08380 21 Mar 2018 09:17:04,056 INFO : Inserting Q14520 21 Mar 2018 09:17:04,602 INFO : Inserting Q14624 21 Mar 2018 09:17:05,528 INFO : Inserting Q14966 21 Mar 2018 09:17:06,135 INFO : Inserting Q15166 21 Mar 2018 09:17:07,078 INFO : Inserting Q16610 21 Mar 2018 09:17:07,682 INFO : Inserting Q5T011 21 Mar 2018 09:17:08,595 INFO : Inserting Q7Z7A1 21 Mar 2018 09:17:09,224 INFO : Inserting Q96IY4 21 Mar 2018 09:17:10,082 INFO : Inserting Q96PD5 21 Mar 2018 09:17:10,629 INFO : Inserting Q9H8K7 21 Mar 2018 09:17:13,045 INFO : Completed import of Skyline document from 2. EPHA_Unique 20170614_2018-03-16_16-22-13.sky.zip 21 Mar 2018 09:17:13,053 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2018/QIMR%20Berghofer%20-%20EAC%20LeMBA%20Validation%20Ochsner%20Cohort/@files/export/xar/experiments_and_runs.xar.exploded/Run28618/2.%20EPHA_Unique%2020170614_2018-03-16_16-22-13.sky.zip into the system 21 Mar 2018 09:17:13,053 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2018/QIMR%20Berghofer%20-%20EAC%20LeMBA%20Validation%20Ochsner%20Cohort/@files/export/xar/experiments_and_runs.xar.exploded/Run28619/2.%20NPL_Unique%2020170614_2018-03-16_16-22-31.sky.zip into the system 21 Mar 2018 09:17:13,057 INFO : Starting import from 2. NPL_Unique 20170614_2018-03-16_16-22-31.sky.zip 21 Mar 2018 09:17:13,062 INFO : Starting to import Skyline document from 2. NPL_Unique 20170614_2018-03-16_16-22-31.sky.zip 21 Mar 2018 09:17:13,062 INFO : Expanding iRT-C18_20151012.irtdb 21 Mar 2018 09:17:13,064 INFO : Expanding LeMBA_Human.blib 21 Mar 2018 09:17:13,077 INFO : Expanding 2. NPL_Unique 20170614.skyd 21 Mar 2018 09:17:14,060 INFO : Expanding 2. NPL_Unique 20170614.sky.view 21 Mar 2018 09:17:14,060 INFO : Expanding 2. NPL_Unique 20170614.sky 21 Mar 2018 09:17:14,875 INFO : Inserting iRT 21 Mar 2018 09:17:21,545 INFO : Inserting O75636 21 Mar 2018 09:17:22,377 INFO : Inserting O75882 21 Mar 2018 09:17:22,939 INFO : Inserting O95445 21 Mar 2018 09:17:23,759 INFO : Inserting P00450 21 Mar 2018 09:17:24,896 INFO : Inserting P00734 21 Mar 2018 09:17:25,740 INFO : Inserting P00736 21 Mar 2018 09:17:26,875 INFO : Inserting P00738 21 Mar 2018 09:17:28,682 INFO : Inserting P00747 21 Mar 2018 09:17:30,067 INFO : Inserting P00748 21 Mar 2018 09:17:30,897 INFO : Inserting P00751 21 Mar 2018 09:17:32,220 INFO : Inserting P00918 21 Mar 2018 09:17:32,769 INFO : Inserting P01008 21 Mar 2018 09:17:34,138 INFO : Inserting P01009 21 Mar 2018 09:17:35,245 INFO : Inserting P01011 21 Mar 2018 09:17:37,093 INFO : Inserting P01012 21 Mar 2018 09:17:37,385 INFO : Inserting P01019 21 Mar 2018 09:17:38,536 INFO : Inserting P01023 21 Mar 2018 09:17:41,027 INFO : Inserting P01024 21 Mar 2018 09:17:42,194 INFO : Inserting P01031 21 Mar 2018 09:17:43,118 INFO : Inserting P01042 21 Mar 2018 09:17:44,653 INFO : Inserting P02647 21 Mar 2018 09:17:45,266 INFO : Inserting P02671 21 Mar 2018 09:17:46,595 INFO : Inserting P02675 21 Mar 2018 09:17:47,209 INFO : Inserting P02679 21 Mar 2018 09:17:47,894 INFO : Inserting P02730 21 Mar 2018 09:17:48,587 INFO : Inserting P02741 21 Mar 2018 09:17:49,200 INFO : Inserting P02745 21 Mar 2018 09:17:49,817 INFO : Inserting P02746 21 Mar 2018 09:17:51,037 INFO : Inserting P02747 21 Mar 2018 09:17:52,012 INFO : Inserting P02748 21 Mar 2018 09:17:54,195 INFO : Inserting P02749 21 Mar 2018 09:17:55,123 INFO : Inserting P02750 21 Mar 2018 09:17:55,738 INFO : Inserting P02751 21 Mar 2018 09:17:56,405 INFO : Inserting P02753 21 Mar 2018 09:17:57,094 INFO : Inserting P02760 21 Mar 2018 09:17:58,380 INFO : Inserting P02765 21 Mar 2018 09:17:59,299 INFO : Inserting P02774 21 Mar 2018 09:18:00,525 INFO : Inserting P02787 21 Mar 2018 09:18:02,078 INFO : Inserting P02790 21 Mar 2018 09:18:03,617 INFO : Inserting P03952 21 Mar 2018 09:18:04,228 INFO : Inserting P04003 21 Mar 2018 09:18:05,455 INFO : Inserting P04004 21 Mar 2018 09:18:06,069 INFO : Inserting P04114 21 Mar 2018 09:18:07,467 INFO : Inserting P04196 21 Mar 2018 09:18:08,704 INFO : Inserting P04217 21 Mar 2018 09:18:09,311 INFO : Inserting P05090 21 Mar 2018 09:18:09,925 INFO : Inserting P05155 21 Mar 2018 09:18:11,298 INFO : Inserting P05156 21 Mar 2018 09:18:12,841 INFO : Inserting P05546 21 Mar 2018 09:18:14,066 INFO : Inserting P06396 21 Mar 2018 09:18:16,085 INFO : Inserting P06681 21 Mar 2018 09:18:16,721 INFO : Inserting P07225 21 Mar 2018 09:18:17,333 INFO : Inserting P07357 21 Mar 2018 09:18:18,358 INFO : Inserting P07996 21 Mar 2018 09:18:19,280 INFO : Inserting P08185 21 Mar 2018 09:18:19,897 INFO : Inserting P08603 21 Mar 2018 09:18:20,517 INFO : Inserting P08697 21 Mar 2018 09:18:21,458 INFO : Inserting P09871 21 Mar 2018 09:18:22,376 INFO : Inserting P0C0L5 21 Mar 2018 09:18:24,148 INFO : Inserting P10643 21 Mar 2018 09:18:25,852 INFO : Inserting P10909 21 Mar 2018 09:18:27,086 INFO : Inserting P12259 21 Mar 2018 09:18:27,710 INFO : Inserting P13671 21 Mar 2018 09:18:28,936 INFO : Inserting P19652 21 Mar 2018 09:18:29,556 INFO : Inserting P19823 21 Mar 2018 09:18:31,085 INFO : Inserting P19827 21 Mar 2018 09:18:32,002 INFO : Inserting P20851 21 Mar 2018 09:18:32,634 INFO : Inserting P27169 21 Mar 2018 09:18:33,861 INFO : Inserting P29622 21 Mar 2018 09:18:35,098 INFO : Inserting P32119 21 Mar 2018 09:18:35,651 INFO : Inserting P33151 21 Mar 2018 09:18:36,569 INFO : Inserting P33981 21 Mar 2018 09:18:37,179 INFO : Inserting P35858 21 Mar 2018 09:18:38,113 INFO : Inserting P36955 21 Mar 2018 09:18:38,726 INFO : Inserting P43652 21 Mar 2018 09:18:40,160 INFO : Inserting P55058 21 Mar 2018 09:18:41,083 INFO : Inserting Q06033 21 Mar 2018 09:18:41,757 INFO : Inserting Q08380 21 Mar 2018 09:18:42,378 INFO : Inserting Q14520 21 Mar 2018 09:18:42,987 INFO : Inserting Q14624 21 Mar 2018 09:18:43,929 INFO : Inserting Q14966 21 Mar 2018 09:18:44,540 INFO : Inserting Q15166 21 Mar 2018 09:18:45,455 INFO : Inserting Q16610 21 Mar 2018 09:18:46,350 INFO : Inserting Q5T011 21 Mar 2018 09:18:47,282 INFO : Inserting Q7Z7A1 21 Mar 2018 09:18:47,837 INFO : Inserting Q96IY4 21 Mar 2018 09:18:48,719 INFO : Inserting Q96PD5 21 Mar 2018 09:18:49,329 INFO : Inserting Q9H8K7 21 Mar 2018 09:18:52,033 INFO : Completed import of Skyline document from 2. NPL_Unique 20170614_2018-03-16_16-22-31.sky.zip 21 Mar 2018 09:18:52,043 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2018/QIMR%20Berghofer%20-%20EAC%20LeMBA%20Validation%20Ochsner%20Cohort/@files/export/xar/experiments_and_runs.xar.exploded/Run28619/2.%20NPL_Unique%2020170614_2018-03-16_16-22-31.sky.zip into the system 21 Mar 2018 09:18:52,043 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2018/QIMR%20Berghofer%20-%20EAC%20LeMBA%20Validation%20Ochsner%20Cohort/@files/export/xar/experiments_and_runs.xar.exploded/Run28620/2.%20JAC_Unique%2020170614_2018-03-16_16-22-28.sky.zip into the system 21 Mar 2018 09:18:52,048 INFO : Starting import from 2. JAC_Unique 20170614_2018-03-16_16-22-28.sky.zip 21 Mar 2018 09:18:52,054 INFO : Starting to import Skyline document from 2. JAC_Unique 20170614_2018-03-16_16-22-28.sky.zip 21 Mar 2018 09:18:52,054 INFO : Expanding iRT-C18_20151012.irtdb 21 Mar 2018 09:18:52,055 INFO : Expanding LeMBA_Human.blib 21 Mar 2018 09:18:52,074 INFO : Expanding 2. JAC_Unique 20170614.skyd 21 Mar 2018 09:18:53,182 INFO : Expanding 2. JAC_Unique 20170614.sky.view 21 Mar 2018 09:18:53,182 INFO : Expanding 2. JAC_Unique 20170614.sky 21 Mar 2018 09:18:54,056 INFO : Inserting iRT 21 Mar 2018 09:19:01,287 INFO : Inserting O75636 21 Mar 2018 09:19:01,847 INFO : Inserting O75882 21 Mar 2018 09:19:02,435 INFO : Inserting O95445 21 Mar 2018 09:19:03,261 INFO : Inserting P00450 21 Mar 2018 09:19:04,396 INFO : Inserting P00734 21 Mar 2018 09:19:05,241 INFO : Inserting P00736 21 Mar 2018 09:19:06,437 INFO : Inserting P00738 21 Mar 2018 09:19:08,264 INFO : Inserting P00747 21 Mar 2018 09:19:09,692 INFO : Inserting P00748 21 Mar 2018 09:19:10,534 INFO : Inserting P00751 21 Mar 2018 09:19:11,884 INFO : Inserting P00918 21 Mar 2018 09:19:12,478 INFO : Inserting P01008 21 Mar 2018 09:19:13,595 INFO : Inserting P01009 21 Mar 2018 09:19:14,737 INFO : Inserting P01011 21 Mar 2018 09:19:16,745 INFO : Inserting P01012 21 Mar 2018 09:19:17,220 INFO : Inserting P01019 21 Mar 2018 09:19:18,314 INFO : Inserting P01023 21 Mar 2018 09:19:20,528 INFO : Inserting P01024 21 Mar 2018 09:19:21,587 INFO : Inserting P01031 21 Mar 2018 09:19:22,427 INFO : Inserting P01042 21 Mar 2018 09:19:23,824 INFO : Inserting P02647 21 Mar 2018 09:19:24,377 INFO : Inserting P02656 21 Mar 2018 09:19:24,974 INFO : Inserting P02671 21 Mar 2018 09:19:25,501 INFO : Inserting P02675 21 Mar 2018 09:19:26,103 INFO : Inserting P02679 21 Mar 2018 09:19:26,798 INFO : Inserting P02730 21 Mar 2018 09:19:27,465 INFO : Inserting P02741 21 Mar 2018 09:19:28,071 INFO : Inserting P02745 21 Mar 2018 09:19:28,681 INFO : Inserting P02746 21 Mar 2018 09:19:29,891 INFO : Inserting P02747 21 Mar 2018 09:19:30,856 INFO : Inserting P02748 21 Mar 2018 09:19:32,957 INFO : Inserting P02749 21 Mar 2018 09:19:33,797 INFO : Inserting P02750 21 Mar 2018 09:19:34,352 INFO : Inserting P02751 21 Mar 2018 09:19:34,916 INFO : Inserting P02753 21 Mar 2018 09:19:35,482 INFO : Inserting P02760 21 Mar 2018 09:19:36,648 INFO : Inserting P02765 21 Mar 2018 09:19:37,492 INFO : Inserting P02774 21 Mar 2018 09:19:38,660 INFO : Inserting P02787 21 Mar 2018 09:19:40,094 INFO : Inserting P02790 21 Mar 2018 09:19:41,487 INFO : Inserting P03952 21 Mar 2018 09:19:42,045 INFO : Inserting P04003 21 Mar 2018 09:19:43,159 INFO : Inserting P04004 21 Mar 2018 09:19:43,719 INFO : Inserting P04114 21 Mar 2018 09:19:44,997 INFO : Inserting P04196 21 Mar 2018 09:19:46,384 INFO : Inserting P04217 21 Mar 2018 09:19:47,007 INFO : Inserting P05090 21 Mar 2018 09:19:47,620 INFO : Inserting P05155 21 Mar 2018 09:19:48,790 INFO : Inserting P05156 21 Mar 2018 09:19:50,202 INFO : Inserting P05546 21 Mar 2018 09:19:51,319 INFO : Inserting P06396 21 Mar 2018 09:19:53,144 INFO : Inserting P06681 21 Mar 2018 09:19:53,702 INFO : Inserting P07225 21 Mar 2018 09:19:54,261 INFO : Inserting P07357 21 Mar 2018 09:19:55,150 INFO : Inserting P07996 21 Mar 2018 09:19:55,992 INFO : Inserting P08185 21 Mar 2018 09:19:56,573 INFO : Inserting P08603 21 Mar 2018 09:19:57,134 INFO : Inserting P08697 21 Mar 2018 09:19:57,978 INFO : Inserting P09871 21 Mar 2018 09:19:58,819 INFO : Inserting P0C0L5 21 Mar 2018 09:20:00,576 INFO : Inserting P10643 21 Mar 2018 09:20:02,399 INFO : Inserting P10909 21 Mar 2018 09:20:03,517 INFO : Inserting P12259 21 Mar 2018 09:20:04,083 INFO : Inserting P13671 21 Mar 2018 09:20:05,189 INFO : Inserting P19652 21 Mar 2018 09:20:05,752 INFO : Inserting P19823 21 Mar 2018 09:20:07,135 INFO : Inserting P19827 21 Mar 2018 09:20:07,960 INFO : Inserting P20851 21 Mar 2018 09:20:08,536 INFO : Inserting P27169 21 Mar 2018 09:20:09,657 INFO : Inserting P29622 21 Mar 2018 09:20:10,776 INFO : Inserting P32119 21 Mar 2018 09:20:11,280 INFO : Inserting P33151 21 Mar 2018 09:20:12,162 INFO : Inserting P33981 21 Mar 2018 09:20:12,713 INFO : Inserting P35858 21 Mar 2018 09:20:13,767 INFO : Inserting P36955 21 Mar 2018 09:20:14,329 INFO : Inserting P43652 21 Mar 2018 09:20:15,524 INFO : Inserting P55058 21 Mar 2018 09:20:16,387 INFO : Inserting P69905 21 Mar 2018 09:20:16,946 INFO : Inserting Q06033 21 Mar 2018 09:20:17,555 INFO : Inserting Q08380 21 Mar 2018 09:20:18,121 INFO : Inserting Q14520 21 Mar 2018 09:20:18,678 INFO : Inserting Q14624 21 Mar 2018 09:20:19,536 INFO : Inserting Q14966 21 Mar 2018 09:20:20,096 INFO : Inserting Q15166 21 Mar 2018 09:20:20,937 INFO : Inserting Q16610 21 Mar 2018 09:20:21,726 INFO : Inserting Q5T011 21 Mar 2018 09:20:22,295 INFO : Inserting Q7Z7A1 21 Mar 2018 09:20:22,860 INFO : Inserting Q96IY4 21 Mar 2018 09:20:23,704 INFO : Inserting Q96PD5 21 Mar 2018 09:20:24,269 INFO : Inserting Q9H8K7 21 Mar 2018 09:20:26,754 INFO : Completed import of Skyline document from 2. JAC_Unique 20170614_2018-03-16_16-22-28.sky.zip 21 Mar 2018 09:20:26,761 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2018/QIMR%20Berghofer%20-%20EAC%20LeMBA%20Validation%20Ochsner%20Cohort/@files/export/xar/experiments_and_runs.xar.exploded/Run28620/2.%20JAC_Unique%2020170614_2018-03-16_16-22-28.sky.zip into the system 21 Mar 2018 09:20:26,764 INFO : Done importing xar 21 Mar 2018 09:20:26,767 INFO : Loading wikis 21 Mar 2018 09:20:26,769 INFO : 0 wikis imported 21 Mar 2018 09:20:26,769 INFO : Done importing wikis 21 Mar 2018 09:20:26,771 INFO : Loading pages and webpart properties 21 Mar 2018 09:20:26,843 INFO : Done importing pages and webpart properties 21 Mar 2018 09:20:26,844 INFO : 21 Mar 2018 09:20:26,844 INFO : Experiment import completed successfully. 21 Mar 2018 09:20:26,844 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentImportTask' 21 Mar 2018 09:20:26,857 INFO : Starting to run task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask' at location 'webserver' 21 Mar 2018 09:20:26,857 INFO : 21 Mar 2018 09:20:26,857 INFO : Finishing up experiment copy. 21 Mar 2018 09:20:26,859 INFO : Creating a new TargetedMS experiment entry in targetedms.ExperimentAnnotations. 21 Mar 2018 09:20:26,910 INFO : Updating access URL to point to the new copy of the data. 21 Mar 2018 09:20:26,978 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask'