11 Jun 2018 14:54:39,844 INFO : Copying experiment "Modular Engineering of L-Tyrosine Production in Escherichia coli" from folder /JBEI/D. Juminaga et al. Appl. Environ. Microbiol. 2012 - Modular Engineering of L-Tyrosine Production in Escherichia coli/Tyrosine pathway engineering proteomic data to /Panorama Public/2018/JBEI - Tyrosine pathway engineering proteomic data
11 Jun 2018 14:54:39,844 INFO : =======================================
11 Jun 2018 14:54:39,983 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentExportTask' at location 'webserver'
11 Jun 2018 14:54:39,986 INFO : 
11 Jun 2018 14:54:39,986 INFO : Exporting experiment.
11 Jun 2018 14:54:40,839 INFO : 
11 Jun 2018 14:54:40,839 INFO : Experiment export completed successfully.
11 Jun 2018 14:54:40,839 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentExportTask'
11 Jun 2018 14:54:40,856 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentImportTask' at location 'webserver'
11 Jun 2018 14:54:40,856 INFO : 
11 Jun 2018 14:54:40,856 INFO : Importing experiment.
11 Jun 2018 14:54:40,860 INFO : Loading folder properties (folder type, settings and active modules)
11 Jun 2018 14:54:40,912 INFO : Done importing folder properties (folder type, settings and active modules)
11 Jun 2018 14:54:40,914 INFO : Loading container specific module properties
11 Jun 2018 14:54:40,919 INFO : Done importing container specific module properties
11 Jun 2018 14:54:40,923 INFO : Loading wikis
11 Jun 2018 14:54:40,925 INFO : 0 wikis imported
11 Jun 2018 14:54:40,925 INFO : Done importing wikis
11 Jun 2018 14:54:40,928 INFO : Loading xar
11 Jun 2018 14:54:40,955 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-4154:TargetedMS.ImportSkyZip'
11 Jun 2018 14:54:40,958 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-4154:TargetedMS.ImportSkyZip.Core'
11 Jun 2018 14:54:40,961 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-4154:TargetedMS.ImportSkyZip.Output'
11 Jun 2018 14:54:40,961 DEBUG: Protocol import complete
11 Jun 2018 14:54:40,962 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-4154:Modular+Engineering+of+L-Tyrosine+Production+in+Escherichia+coli'
11 Jun 2018 14:54:40,962 DEBUG: Experiment/Run group import complete
11 Jun 2018 14:54:40,976 DEBUG: Protocol action set import complete
11 Jun 2018 14:54:41,002 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4154:TargetedMS.ImportSkyZip'
11 Jun 2018 14:54:41,073 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-4154:fb45697e-59fc-1035-868f-3013bb9bbf8d'
11 Jun 2018 14:54:41,073 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4154:TargetedMS.ImportSkyZip.Core'
11 Jun 2018 14:54:41,076 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-4154:TargetedMS.ImportSkyZip.Output'
11 Jun 2018 14:54:41,077 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-4154:fb4569d0-59fc-1035-868f-3013bb9bbf8d'
11 Jun 2018 14:54:41,078 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2018/JBEI%20-%20Tyrosine%20pathway%20engineering%20proteomic%20data/@files/export/xar/experiments_and_runs.xar.exploded/Run19346/Juminaga%20tyrosine%20pathway%20engineering%20AEM%202014_2017-08-02_15-57-20.sky.zip into the system
11 Jun 2018 14:54:41,079 INFO : Starting import from Juminaga tyrosine pathway engineering AEM 2014_2017-08-02_15-57-20.sky.zip
11 Jun 2018 14:54:41,086 INFO : Starting to import Skyline document from Juminaga tyrosine pathway engineering AEM 2014_2017-08-02_15-57-20.sky.zip
11 Jun 2018 14:54:41,086 INFO : Expanding Juminaga tyrosine pathway engineering AEM 2014.skyd
11 Jun 2018 14:54:41,108 INFO : Expanding Juminaga tyrosine pathway engineering AEM 2014.sky.view
11 Jun 2018 14:54:41,109 INFO : Expanding Juminaga tyrosine pathway engineering AEM 2014.sky
11 Jun 2018 14:54:41,248 INFO : Inserting AROA
11 Jun 2018 14:54:41,539 INFO : Inserting AROB
11 Jun 2018 14:54:41,693 INFO : Inserting AROC
11 Jun 2018 14:54:41,810 INFO : Inserting AROD
11 Jun 2018 14:54:42,023 INFO : Inserting AROE
11 Jun 2018 14:54:42,265 INFO : Inserting AROF
11 Jun 2018 14:54:42,515 INFO : Inserting AROG
11 Jun 2018 14:54:42,686 INFO : Inserting AROH
11 Jun 2018 14:54:42,755 INFO : Inserting AROK
11 Jun 2018 14:54:42,853 INFO : Inserting AROL
11 Jun 2018 14:54:42,958 INFO : Inserting TRPE
11 Jun 2018 14:54:43,078 INFO : Inserting TYRA
11 Jun 2018 14:54:43,147 INFO : Inserting TYRB
11 Jun 2018 14:54:43,394 INFO : Inserting YDIB
11 Jun 2018 14:54:43,665 INFO : Inserting TKT1
11 Jun 2018 14:54:43,932 INFO : Inserting PPSA
11 Jun 2018 14:54:45,432 INFO : Completed import of Skyline document from Juminaga tyrosine pathway engineering AEM 2014_2017-08-02_15-57-20.sky.zip
11 Jun 2018 14:54:45,441 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2018/JBEI%20-%20Tyrosine%20pathway%20engineering%20proteomic%20data/@files/export/xar/experiments_and_runs.xar.exploded/Run19346/Juminaga%20tyrosine%20pathway%20engineering%20AEM%202014_2017-08-02_15-57-20.sky.zip into the system
11 Jun 2018 14:54:45,462 INFO : Done importing xar
11 Jun 2018 14:54:45,492 INFO : Loading pages and webpart properties
11 Jun 2018 14:54:45,542 INFO : Done importing pages and webpart properties
11 Jun 2018 14:54:45,543 INFO : 
11 Jun 2018 14:54:45,543 INFO : Experiment import completed successfully.
11 Jun 2018 14:54:45,543 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentImportTask'
11 Jun 2018 14:54:45,561 INFO : Starting to run task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask' at location 'webserver'
11 Jun 2018 14:54:45,561 INFO : 
11 Jun 2018 14:54:45,561 INFO : Finishing up experiment copy.
11 Jun 2018 14:54:45,566 INFO : Creating a new TargetedMS experiment entry in targetedms.ExperimentAnnotations.
11 Jun 2018 14:54:45,574 INFO : Updating access URL to point to the new copy of the data.
11 Jun 2018 14:54:45,648 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask'