14 Jun 2017 09:36:53,147 INFO : Copying experiment "An integrative proteogenomics strategy to identify the entire protein coding potential of prokaryotic genomes" from folder /Wollscheid/Bartonella_Proteogenomics to /Panorama Public/2017/Wollscheid - Bartonella_Proteogenomics
14 Jun 2017 09:36:53,148 INFO : =======================================
14 Jun 2017 09:36:53,213 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentExportTask' at location 'webserver'
14 Jun 2017 09:36:53,217 INFO : 
14 Jun 2017 09:36:53,217 INFO : Exporting experiment.
14 Jun 2017 09:36:55,460 INFO : 
14 Jun 2017 09:36:55,460 INFO : Experiment export completed successfully.
14 Jun 2017 09:36:55,460 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentExportTask'
14 Jun 2017 09:36:55,470 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentImportTask' at location 'webserver'
14 Jun 2017 09:36:55,470 INFO : 
14 Jun 2017 09:36:55,470 INFO : Importing experiment.
14 Jun 2017 09:36:55,486 WARN : Import of groups outside of project context not supported.
14 Jun 2017 09:36:55,490 INFO : Loading folder properties (folder type, settings and active modules)
14 Jun 2017 09:36:55,549 INFO : Done importing folder properties (folder type, settings and active modules)
14 Jun 2017 09:36:55,551 INFO : Loading container specific module properties
14 Jun 2017 09:36:55,555 INFO : Done importing container specific module properties
14 Jun 2017 09:36:55,557 INFO : Loading wikis
14 Jun 2017 09:36:55,569 INFO : 0 wikis imported
14 Jun 2017 09:36:55,569 INFO : Done importing wikis
14 Jun 2017 09:36:55,572 INFO : Loading xar
14 Jun 2017 09:36:55,791 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-3098:TargetedMS.ImportSkyZip'
14 Jun 2017 09:36:55,798 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-3098:TargetedMS.ImportSkyZip.Core'
14 Jun 2017 09:36:55,805 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-3098:TargetedMS.ImportSkyZip.Output'
14 Jun 2017 09:36:55,806 DEBUG: Protocol import complete
14 Jun 2017 09:36:55,845 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-3098:An+integrative+proteogenomics+strategy+to+identify+the+entire+protein+coding+potential+of+prokaryotic+genomes'
14 Jun 2017 09:36:55,845 DEBUG: Experiment/Run group import complete
14 Jun 2017 09:36:55,877 DEBUG: Protocol action set import complete
14 Jun 2017 09:36:55,921 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3098:TargetedMS.ImportSkyZip'
14 Jun 2017 09:36:56,104 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-3098:84730e3d-3177-1035-a2e7-3013bb9b8b42'
14 Jun 2017 09:36:56,104 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3098:TargetedMS.ImportSkyZip.Core'
14 Jun 2017 09:36:56,111 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3098:TargetedMS.ImportSkyZip.Output'
14 Jun 2017 09:36:56,113 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-3098:84730eff-3177-1035-a2e7-3013bb9b8b42'
14 Jun 2017 09:36:56,129 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3098:TargetedMS.ImportSkyZip'
14 Jun 2017 09:36:56,145 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-3098:84730cc9-3177-1035-a2e7-3013bb9b8b42'
14 Jun 2017 09:36:56,145 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3098:TargetedMS.ImportSkyZip.Core'
14 Jun 2017 09:36:56,149 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3098:TargetedMS.ImportSkyZip.Output'
14 Jun 2017 09:36:56,151 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-3098:84730db9-3177-1035-a2e7-3013bb9b8b42'
14 Jun 2017 09:36:56,153 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2017/Wollscheid%20-%20Bartonella_Proteogenomics/@files/export/xar/experiments_and_runs.xar.exploded/Run17377/20170612_Bartonella_Cy_TM_PRM_2017-06-12_13-04-13.sky.zip into the system
14 Jun 2017 09:36:56,158 INFO : Starting import from 20170612_Bartonella_Cy_TM_PRM_2017-06-12_13-04-13.sky.zip
14 Jun 2017 09:36:56,174 INFO : Starting to import Skyline document from 20170612_Bartonella_Cy_TM_PRM_2017-06-12_13-04-13.sky.zip
14 Jun 2017 09:36:56,174 INFO : Expanding 20160927_Bart_iRT.irtdb
14 Jun 2017 09:36:56,175 INFO : Expanding 20170612_Bartonella_Cy_TM_PRM.skyd
14 Jun 2017 09:36:56,674 INFO : Expanding 20170612_Bartonella_Cy_TM_PRM.sky.view
14 Jun 2017 09:36:56,674 INFO : Expanding 20170612_Bartonella_Cy_TM_PRM.sky
14 Jun 2017 09:36:57,003 INFO : Inserting BHPROD|MQB277_772686_773390_+3_ATG_234
14 Jun 2017 09:36:57,148 INFO : Inserting BH_RS05255_p|rso|ens|geno|chemg|prod|NC_005956_1187589_1189322_+3_ATG_577
14 Jun 2017 09:36:57,705 INFO : Inserting BHPROD|MQB277_313197_310660_-1_ATG_845
14 Jun 2017 09:36:57,824 INFO : Inserting BH_RS03120|rso|ens|geno|+1aa_chemg|prod|NC_005956_737930_738976_+2_ATG_348
14 Jun 2017 09:36:57,942 INFO : Inserting BHPROD|MQB277_1348473_1349384_+3_ATG_303
14 Jun 2017 09:36:58,058 INFO : Inserting BHPROD|MQB277_434987_434787_-2_ATG_66
14 Jun 2017 09:36:58,159 INFO : Inserting BH_RS01385|geno|prod|NC_005956_365498_365740_+2_ATG_80
14 Jun 2017 09:36:58,617 INFO : Inserting BH_RS05235_p|geno|prod|NC_005956_1180943_1180695_-3_ATG_82
14 Jun 2017 09:36:58,734 INFO : Inserting BHPROD|MQB277_1328462_1329802_+2_ATG_446
14 Jun 2017 09:36:58,850 INFO : Inserting BHPROD|MQB277_1868654_1867311_-2_ATG_447
14 Jun 2017 09:36:59,071 INFO : Inserting BHORF|NC_005956_1392322_1392423_+1_ATG_33
14 Jun 2017 09:36:59,383 INFO : Inserting BH_RS03865_p|rso|ens|geno|chemg|prod|NC_005956_896083_896409_+1_ATG_108
14 Jun 2017 09:36:59,680 INFO : Inserting BHRSO10720|ens|geno|+12aa_chemg|NC_005956_1174628_1174395_-3_CTG_77
14 Jun 2017 09:36:59,902 INFO : Inserting BH_RS06460|prod|NC_005956_1509467_1509709_+2_ATG_80
14 Jun 2017 09:37:00,054 INFO : Inserting BH_RS01750_+63aa_chemg|NC_005956_416972_416364_-3_ATG_202
14 Jun 2017 09:37:00,577 INFO : Inserting BH_RS01980_+22aa_chemg|NC_005956_466378_464624_-1_TTG_584
14 Jun 2017 09:37:00,726 INFO : Inserting BHRSO14190|ens|geno|+13aa_chemg|prod|NC_005956_1630823_1630671_-3_ATG_50
14 Jun 2017 09:37:00,931 INFO : Inserting BHPROD|MQB277_1022721_1021576_-1_ATG_381
14 Jun 2017 09:37:01,066 INFO : Inserting BH_RS07235|+3aa_chemg|prod|NC_005956_1673314_1672901_-1_TTG_137
14 Jun 2017 09:37:01,361 INFO : Inserting BH_RS01980|rso|ens|geno|+22aa_chemg|+8aa_prod|NC_005956_466312_464624_-1_ATG_562
14 Jun 2017 09:37:01,477 INFO : Inserting BH_RS07350|rso|ens|geno|chemg|-2aa_prod|NC_005956_1689906_1690343_+3_ATG_145
14 Jun 2017 09:37:01,734 INFO : Inserting BH_RS03120_+1aa_chemg|NC_005956_737927_738976_+2_TTG_349
14 Jun 2017 09:37:01,975 INFO : Inserting BH_RS00785|-6aa_rso|+19aa_chemg|prod|NC_005956_221426_222682_+2_ATG_418
14 Jun 2017 09:37:02,132 INFO : Inserting BH_RS01740|-1aa_rso|chemg|prod|NC_005956_415537_415830_+1_ATG_97
14 Jun 2017 09:37:02,319 INFO : Inserting BH_RS01950|-33aa_rso|chemg|prod|NC_005956_458693_457809_-3_ATG_294
14 Jun 2017 09:37:02,560 INFO : Inserting BH_RS02705|+10aa_rso|prod|NC_005956_636879_635590_-2_ATG_429
14 Jun 2017 09:37:02,771 INFO : Inserting BH_RS02710|-47aa_rso|chemg|prod|NC_005956_637444_641460_+1_ATG_1338
14 Jun 2017 09:37:02,924 INFO : Inserting BH_RS03790|-38aa_rso|chemg|prod|NC_005956_881950_883134_+1_GTG_394
14 Jun 2017 09:37:03,149 INFO : Inserting BH_RS04075|+10aa_rso|prod|NC_005956_939449_939661_+2_GTG_70
14 Jun 2017 09:37:03,250 INFO : Inserting BH_RS05450|+26aa_rso|+45aa_chemg|prod|NC_005956_1238230_1237253_-1_ATG_325
14 Jun 2017 09:37:03,385 INFO : Inserting BH_RS05730|-19aa_rso|+41aa_chemg|+33aa_prod|NC_005956_1316539_1315040_-1_ATG_499
14 Jun 2017 09:37:03,583 INFO : Inserting BH_RS05955|-34aa_rso|chemg|prod|NC_005956_1369032_1368217_-2_GTG_271
14 Jun 2017 09:37:03,818 INFO : Inserting BH_RS06385|-42aa_rso|+5aa_chemg|prod|NC_005956_1475631_1474501_-2_ATG_376
14 Jun 2017 09:37:03,965 INFO : Inserting BH_RS06450|-11aa_rso|+5aa_chemg|prod|NC_005956_1507170_1506169_-2_ATG_333
14 Jun 2017 09:37:04,169 INFO : Inserting BH_RS06910|-39aa_rso|chemg|prod|NC_005956_1618129_1616804_-1_ATG_441
14 Jun 2017 09:37:04,371 INFO : Inserting BH_RS07620|+34aa_rso|NC_005956_1747631_1749193_+2_ATG_520
14 Jun 2017 09:37:04,594 INFO : Inserting BH_RS07770|+6aa_rso|+8aa_chemg|NC_005956_1783093_1783767_+1_ATG_224
14 Jun 2017 09:37:04,850 INFO : Inserting BH_RS07815|-6aa_rso|prod|NC_005956_1802308_1802021_-1_GTG_95
14 Jun 2017 09:37:05,021 INFO : Inserting BH_RS04375_+2aa_orf|NC_005956_1010236_1009622_-1_TTG_204
14 Jun 2017 09:37:05,135 INFO : Inserting BH_RS04375_+1aa_orf|NC_005956_1010233_1009622_-1_TTG_203
14 Jun 2017 09:37:05,261 INFO : Inserting BH_RS01725_p|rso|ens|geno|+51aa_chemg|-10aa_prod|NC_005956_414618_414079_-2_ATG_179
14 Jun 2017 09:37:05,517 INFO : Inserting BHORF|NC_005956_842169_842240_+3_ATG_23
14 Jun 2017 09:37:05,639 INFO : Inserting BH_RS04005_+56aa_rso|ens|geno|chemg|NC_005956_926836_928632_+1_ATG_598
14 Jun 2017 09:37:05,777 INFO : Inserting BH_RS06550_p|orf|NC_005956_1532223_1532378_+3_ATG_51
14 Jun 2017 09:37:05,960 INFO : Inserting BHRSO07980|ens|geno|+12aa_chemg|NC_005956_904632_904865_+3_CTG_77
14 Jun 2017 09:37:06,114 INFO : Inserting BHORF|NC_005956_32067_31933_-2_ATG_44
14 Jun 2017 09:37:06,220 INFO : Inserting BHPROD|MQB277_501616_499922_-3_ATG_564
14 Jun 2017 09:37:06,328 INFO : Inserting BHPROD|MQB277_214117_214854_+1_ATG_245
14 Jun 2017 09:37:06,502 INFO : Inserting BHPROD|NC_005956_1506024_1506185_+3_ATG_53
14 Jun 2017 09:37:06,691 INFO : Inserting BH_RS04375|rso|ens|geno|+3aa_chemg|prod|NC_005956_1010230_1009622_-1_ATG_202
14 Jun 2017 09:37:06,969 INFO : Inserting BHPROD|NC_005956_248423_248274_-3_ATG_49
14 Jun 2017 09:37:07,366 INFO : Inserting BH_RS01965_+3aa_chemg|NC_005956_460744_459992_-1_ATG_250
14 Jun 2017 09:37:07,496 INFO : Inserting BHGENO0898|-21aa_chemg|prod|NC_005956_922641_922847_+3_ATG_68
14 Jun 2017 09:37:07,841 INFO : Inserting BHCHEMG|NC_005956_1680451_1680654_+1_ATG_67
14 Jun 2017 09:37:08,129 INFO : Inserting BHPROD|MQB277_124383_115819_-1_ATG_2854
14 Jun 2017 09:37:08,238 INFO : Inserting BHGENO0455|+24aa_chemg|prod|NC_005956_453228_453085_-2_ATG_47
14 Jun 2017 09:37:08,377 INFO : Inserting BHORF|NC_005956_1211005_1210769_-1_ATG_78
14 Jun 2017 09:37:08,522 INFO : Inserting BH_RS07170_p_+280aa_rso|ens|geno|prod|NC_005956_1657853_1658998_+2_ATG_381
14 Jun 2017 09:37:08,969 INFO : Inserting BH_RS08145|chemg|prod|NC_005956_1870496_1870317_-3_ATG_59
14 Jun 2017 09:37:09,315 INFO : Inserting BHRSO01510|ens|geno|+15aa_chemg|prod|NC_005956_205378_214488_+1_ATG_3036
14 Jun 2017 09:37:10,038 INFO : Inserting BHGENO1252_-28aa_prod|NC_005956_1266289_1266107_-1_ATG_60
14 Jun 2017 09:37:10,375 INFO : Inserting BH_RS02905_p_+27aa_chemg|NC_005956_689177_689647_+2_TTG_156
14 Jun 2017 09:37:10,579 INFO : Inserting BH_RS03265_p|geno|chemg|prod|NC_005956_779536_779742_+1_ATG_68
14 Jun 2017 09:37:10,700 INFO : Inserting BHGENO1347|prod|NC_005956_1365815_1365937_+2_ATG_40
14 Jun 2017 09:37:10,885 INFO : Inserting BHPROD|MQB277_1181453_1181022_-2_ATG_143
14 Jun 2017 09:37:10,993 INFO : Inserting BH_RS00045_p|rso|ens|geno|chemg|prod|NC_005956_11056_9215_-1_ATG_613
14 Jun 2017 09:37:11,523 INFO : Inserting BHPROD|MQB277_1322228_1321755_-2_ATG_157
14 Jun 2017 09:37:11,694 INFO : Inserting BHORF|NC_005956_318344_318478_+2_ATG_44
14 Jun 2017 09:37:11,873 INFO : Inserting BH_RS05910_p|chemg|prod|NC_005956_1359604_1358879_-1_ATG_241
14 Jun 2017 09:37:12,410 INFO : Inserting BHPROD|MQB277_1482632_1479591_-2_ATG_1013
14 Jun 2017 09:37:13,318 INFO : Inserting BHPROD|MQB277_1488740_1485681_-2_ATG_1019
14 Jun 2017 09:37:13,749 INFO : Inserting BH_RS00760_p_+95aa_rso|ens|geno|chemg|prod|NC_005956_216149_217459_+2_ATG_436
14 Jun 2017 09:37:14,287 INFO : Inserting BH_RS08360_p_+94aa_rso|ens|geno|prod|NC_005956_1919910_1921160_+3_ATG_416
14 Jun 2017 09:37:14,915 INFO : Inserting BH_RS00155|-5aa_geno_fCDS4_p|+4aa_chemg|prod|NC_005956_37874_37404_-3_ATG_156
14 Jun 2017 09:37:15,193 INFO : Inserting BH_RS07350_-2aa_prod|NC_005956_1689912_1690343_+3_ATG_143
14 Jun 2017 09:37:15,360 INFO : Inserting BH_RS00170_+2aa_rso|ens|geno|chemg|NC_005956_44336_43332_-3_TTG_334
14 Jun 2017 09:37:15,768 INFO : Inserting BH_RS00060_+4aa_chemg|prod|NC_005956_13874_12930_-3_GTG_314
14 Jun 2017 09:37:16,027 INFO : Inserting BH_RS01840|rso|ens|geno|chemg|-2aa_prod|NC_005956_426588_427751_+3_ATG_387
14 Jun 2017 09:37:16,298 INFO : Inserting BH_RS00170|+2aa_rso|prod|NC_005956_44330_43332_-3_ATG_332
14 Jun 2017 09:37:16,473 INFO : Inserting BH_RS05885|rso|ens|geno|chemg|prod|NC_005956_1352974_1352192_-1_GTG_260
14 Jun 2017 09:37:16,825 INFO : Inserting BH_RS03465_+136aa_rso|ens|geno|NC_005956_814642_815256_+1_ATG_204
14 Jun 2017 09:37:17,073 INFO : Inserting BHPROD|MQB277_1379912_1378368_-2_ATG_514
14 Jun 2017 09:37:17,239 INFO : Inserting BHPROD|MQB277_1485255_1483354_-1_ATG_633
14 Jun 2017 09:37:18,133 INFO : Inserting BH_RS06435|geno|chemg|prod|NC_005956_1503851_1503621_-3_ATG_76
14 Jun 2017 09:37:18,712 INFO : Inserting BHORF|NC_005956_1458660_1458538_-2_GTG_40
14 Jun 2017 09:37:18,999 INFO : Inserting BHPROD|MQB277_214955_235648_+2_GTG_6897
14 Jun 2017 09:37:19,748 INFO : Inserting BHORF|NC_005956_1305464_1305568_+2_ATG_34
14 Jun 2017 09:37:19,889 INFO : Inserting BH_RS06550_p_+196aa_rso|ens|geno|chemg|prod|NC_005956_1530764_1532368_+2_ATG_534
14 Jun 2017 09:37:20,482 INFO : Inserting BH_RS06340_p|rso|ens|geno_fCDS_p|chemg|prod|NC_005956_1462346_1459863_-3_ATG_827
14 Jun 2017 09:37:21,027 INFO : Inserting BH_RS01070_p|rso|ens|geno|+8aa_chemg|prod|NC_005956_294440_292854_-3_ATG_528
14 Jun 2017 09:37:21,576 INFO : Inserting iRT-C18
14 Jun 2017 09:37:28,816 INFO : Completed import of Skyline document from 20170612_Bartonella_Cy_TM_PRM_2017-06-12_13-04-13.sky.zip
14 Jun 2017 09:37:28,856 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2017/Wollscheid%20-%20Bartonella_Proteogenomics/@files/export/xar/experiments_and_runs.xar.exploded/Run17377/20170612_Bartonella_Cy_TM_PRM_2017-06-12_13-04-13.sky.zip into the system
14 Jun 2017 09:37:28,856 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2017/Wollscheid%20-%20Bartonella_Proteogenomics/@files/export/xar/experiments_and_runs.xar.exploded/Run17376/20170612_Bartonella_referencePeptides_2017-06-12_13-01-06.sky.zip into the system
14 Jun 2017 09:37:28,859 INFO : Starting import from 20170612_Bartonella_referencePeptides_2017-06-12_13-01-06.sky.zip
14 Jun 2017 09:37:28,862 INFO : Starting to import Skyline document from 20170612_Bartonella_referencePeptides_2017-06-12_13-01-06.sky.zip
14 Jun 2017 09:37:28,862 INFO : Expanding 20160927_Bart_iRT.irtdb
14 Jun 2017 09:37:28,862 INFO : Expanding 20170612_Bartonella_referencePeptides.skyd
14 Jun 2017 09:37:28,936 INFO : Expanding 20170612_Bartonella_referencePeptides.sky.view
14 Jun 2017 09:37:28,936 INFO : Expanding 20170612_Bartonella_referencePeptides.sky
14 Jun 2017 09:37:29,065 INFO : Inserting BHPROD|MQB277_124383_115819_-1_ATG_2854
14 Jun 2017 09:37:29,116 INFO : Inserting BHPROD|MQB277_313197_310660_-1_ATG_845
14 Jun 2017 09:37:29,180 INFO : Inserting BHPROD|MQB277_434987_434787_-2_ATG_66
14 Jun 2017 09:37:29,211 INFO : Inserting BHPROD|MQB277_501616_499922_-3_ATG_564
14 Jun 2017 09:37:29,268 INFO : Inserting BHPROD|MQB277_772686_773390_+3_ATG_234
14 Jun 2017 09:37:29,326 INFO : Inserting BHPROD|MQB277_1022721_1021576_-1_ATG_381
14 Jun 2017 09:37:29,407 INFO : Inserting BHPROD|MQB277_1181453_1181022_-2_ATG_143
14 Jun 2017 09:37:29,485 INFO : Inserting BHPROD|MQB277_1322228_1321755_-2_ATG_157
14 Jun 2017 09:37:29,644 INFO : Inserting BHPROD|MQB277_1328462_1329802_+2_ATG_446
14 Jun 2017 09:37:29,763 INFO : Inserting BHPROD|MQB277_1348473_1349384_+3_ATG_303
14 Jun 2017 09:37:29,857 INFO : Inserting BHPROD|MQB277_1868654_1867311_-2_ATG_447
14 Jun 2017 09:37:30,013 INFO : Inserting BHPROD|MQB277_214117_214854_+1_ATG_245
14 Jun 2017 09:37:30,221 INFO : Inserting BHPROD|MQB277_214955_235648_+2_GTG_6897
14 Jun 2017 09:37:31,100 INFO : Inserting BHPROD|MQB277_1379912_1378368_-2_ATG_514
14 Jun 2017 09:37:31,226 INFO : Inserting BHPROD|MQB277_1482632_1479591_-2_ATG_1013
14 Jun 2017 09:37:32,182 INFO : Inserting BHPROD|MQB277_1488740_1485681_-2_ATG_1019
14 Jun 2017 09:37:32,598 INFO : Inserting BHCHEMG|NC_005956_1680451_1680654_+1_ATG_67
14 Jun 2017 09:37:32,996 INFO : Inserting BHGENO0455|+24aa_chemg|prod|NC_005956_453228_453085_-2_ATG_47
14 Jun 2017 09:37:33,176 INFO : Inserting BH_RS03265_p|geno|chemg|prod|NC_005956_779536_779742_+1_ATG_68
14 Jun 2017 09:37:33,258 INFO : Inserting BHGENO0898|-21aa_chemg|prod|NC_005956_922641_922847_+3_ATG_68
14 Jun 2017 09:37:33,649 INFO : Inserting BHGENO1252_-28aa_prod|NC_005956_1266289_1266107_-1_ATG_60
14 Jun 2017 09:37:34,087 INFO : Inserting BHGENO1347|prod|NC_005956_1365815_1365937_+2_ATG_40
14 Jun 2017 09:37:34,194 INFO : Inserting BH_RS02905_p_+27aa_chemg|NC_005956_689177_689647_+2_TTG_156
14 Jun 2017 09:37:34,464 INFO : Inserting BH_RS05235_p|geno|prod|NC_005956_1180943_1180695_-3_ATG_82
14 Jun 2017 09:37:34,687 INFO : Inserting BHORF|NC_005956_1211005_1210769_-1_ATG_78
14 Jun 2017 09:37:34,790 INFO : Inserting BHORF|NC_005956_1305464_1305568_+2_ATG_34
14 Jun 2017 09:37:34,969 INFO : Inserting BHORF|NC_005956_1392322_1392423_+1_ATG_33
14 Jun 2017 09:37:35,194 INFO : Inserting BHORF|NC_005956_1458660_1458538_-2_GTG_40
14 Jun 2017 09:37:35,425 INFO : Inserting BH_RS06550_p|orf|NC_005956_1532223_1532378_+3_ATG_51
14 Jun 2017 09:37:35,613 INFO : Inserting BHORF|NC_005956_318344_318478_+2_ATG_44
14 Jun 2017 09:37:35,821 INFO : Inserting BHORF|NC_005956_32067_31933_-2_ATG_44
14 Jun 2017 09:37:35,912 INFO : Inserting BHORF|NC_005956_842169_842240_+3_ATG_23
14 Jun 2017 09:37:36,109 INFO : Inserting BHPROD|NC_005956_1506024_1506185_+3_ATG_53
14 Jun 2017 09:37:36,337 INFO : Inserting BHPROD|NC_005956_248423_248274_-3_ATG_49
14 Jun 2017 09:37:36,581 INFO : Inserting  BH_RS00045_p|rso|ens|geno|chemg|prod|NC_005956_11056_9215_-1_ATG_613
14 Jun 2017 09:37:36,936 INFO : Inserting BHRSO01510|ens|geno|+15aa_chemg|prod|NC_005956_205378_214488_+1_ATG_3036
14 Jun 2017 09:37:37,671 INFO : Inserting BH_RS01070_p|rso|ens|geno|+8aa_chemg|prod|NC_005956_294440_292854_-3_ATG_528
14 Jun 2017 09:37:38,372 INFO : Inserting BH_RS01725_p|rso|ens|geno|+51aa_chemg|-10aa_prod|NC_005956_414618_414079_-2_ATG_179
14 Jun 2017 09:37:38,756 INFO : Inserting BH_RS03865_p|rso|ens|geno|chemg|prod|NC_005956_896083_896409_+1_ATG_108
14 Jun 2017 09:37:39,216 INFO : Inserting BHRSO07980|ens|geno|+12aa_chemg|NC_005956_904632_904865_+3_CTG_77
14 Jun 2017 09:37:39,415 INFO : Inserting BHRSO10720|ens|geno|+12aa_chemg|NC_005956_1174628_1174395_-3_CTG_77
14 Jun 2017 09:37:39,579 INFO : Inserting BH_RS05255_p|rso|ens|geno|chemg|prod|NC_005956_1187589_1189322_+3_ATG_577
14 Jun 2017 09:37:39,983 INFO : Inserting BHRSO14190|ens|geno|+13aa_chemg|prod|NC_005956_1630823_1630671_-3_ATG_50
14 Jun 2017 09:37:40,128 INFO : Inserting BH_RS00060_+4aa_chemg|prod|NC_005956_13874_12930_-3_GTG_314
14 Jun 2017 09:37:40,472 INFO : Inserting BH_RS00155|-5aa_geno_fCDS4_p|+4aa_chemg|prod|NC_005956_37874_37404_-3_ATG_156
14 Jun 2017 09:37:40,849 INFO : Inserting BH_RS00170_+2aa_rso|ens|geno|chemg|NC_005956_44336_43332_-3_TTG_334
14 Jun 2017 09:37:41,325 INFO : Inserting BH_RS00170|+2aa_rso|prod|NC_005956_44330_43332_-3_ATG_332
14 Jun 2017 09:37:41,541 INFO : Inserting BH_RS00760_p_+95aa_rso|ens|geno|chemg|prod|NC_005956_216149_217459_+2_ATG_436
14 Jun 2017 09:37:42,243 INFO : Inserting BH_RS01385|geno|prod|NC_005956_365498_365740_+2_ATG_80
14 Jun 2017 09:37:42,665 INFO : Inserting BH_RS01750_+63aa_chemg|NC_005956_416972_416364_-3_ATG_202
14 Jun 2017 09:37:43,299 INFO : Inserting BH_RS01840|rso|ens|geno|chemg|-2aa_prod|NC_005956_426588_427751_+3_ATG_387
14 Jun 2017 09:37:43,619 INFO : Inserting BH_RS01965_+3aa_chemg|NC_005956_460744_459992_-1_ATG_250
14 Jun 2017 09:37:43,734 INFO : Inserting BH_RS01980_+22aa_chemg|NC_005956_466378_464624_-1_TTG_584
14 Jun 2017 09:37:43,903 INFO : Inserting BH_RS01980|rso|ens|geno|+22aa_chemg|+8aa_prod|NC_005956_466312_464624_-1_ATG_562
14 Jun 2017 09:37:44,041 INFO : Inserting BH_RS03120_+1aa_chemg|NC_005956_737927_738976_+2_TTG_349
14 Jun 2017 09:37:44,246 INFO : Inserting BH_RS03120|rso|ens|geno|+1aa_chemg|prod|NC_005956_737930_738976_+2_ATG_348
14 Jun 2017 09:37:44,410 INFO : Inserting BH_RS03465_+136aa_rso|ens|geno|NC_005956_814642_815256_+1_ATG_204
14 Jun 2017 09:37:44,630 INFO : Inserting BH_RS04005_+56aa_rso|ens|geno|chemg|NC_005956_926836_928632_+1_ATG_598
14 Jun 2017 09:37:44,853 INFO : Inserting BH_RS00785|-6aa_rso|+19aa_chemg|prod|NC_005956_221426_222682_+2_ATG_418
14 Jun 2017 09:37:44,970 INFO : Inserting BH_RS01740|-1aa_rso|chemg|prod|NC_005956_415537_415830_+1_ATG_97
14 Jun 2017 09:37:45,194 INFO : Inserting BH_RS02710|-47aa_rso|chemg|prod|NC_005956_637444_641460_+1_ATG_1338
14 Jun 2017 09:37:45,333 INFO : Inserting BH_RS03790|-38aa_rso|chemg|prod|NC_005956_881950_883134_+1_GTG_394
14 Jun 2017 09:37:45,937 INFO : Inserting BH_RS04075|+10aa_rso|prod|NC_005956_939449_939661_+2_GTG_70
14 Jun 2017 09:37:46,015 INFO : Inserting BH_RS05450|+26aa_rso|+45aa_chemg|prod|NC_005956_1238230_1237253_-1_ATG_325
14 Jun 2017 09:37:46,422 INFO : Inserting BH_RS05730|-19aa_rso|+41aa_chemg|+33aa_prod|NC_005956_1316539_1315040_-1_ATG_499
14 Jun 2017 09:37:46,668 INFO : Inserting BH_RS05955|-34aa_rso|chemg|prod|NC_005956_1369032_1368217_-2_GTG_271
14 Jun 2017 09:37:47,097 INFO : Inserting BH_RS06385|-42aa_rso|+5aa_chemg|prod|NC_005956_1475631_1474501_-2_ATG_376
14 Jun 2017 09:37:47,285 INFO : Inserting BH_RS06450|-11aa_rso|+5aa_chemg|prod|NC_005956_1507170_1506169_-2_ATG_333
14 Jun 2017 09:37:47,496 INFO : Inserting BH_RS06910|-39aa_rso|chemg|prod|NC_005956_1618129_1616804_-1_ATG_441
14 Jun 2017 09:37:47,694 INFO : Inserting BH_RS07815|-6aa_rso|prod|NC_005956_1802308_1802021_-1_GTG_95
14 Jun 2017 09:37:47,881 INFO : Inserting BH_RS01950|-33aa_rso|chemg|prod|NC_005956_458693_457809_-3_ATG_294
14 Jun 2017 09:37:48,057 INFO : Inserting BH_RS02705|+10aa_rso|prod|NC_005956_636879_635590_-2_ATG_429
14 Jun 2017 09:37:48,220 INFO : Inserting BH_RS07620|+34aa_rso|NC_005956_1747631_1749193_+2_ATG_520
14 Jun 2017 09:37:48,518 INFO : Inserting BH_RS07770|+6aa_rso|+8aa_chemg|NC_005956_1783093_1783767_+1_ATG_224
14 Jun 2017 09:37:48,836 INFO : Inserting BH_RS04375_+2aa_orf|NC_005956_1010236_1009622_-1_TTG_204
14 Jun 2017 09:37:49,089 INFO : Inserting BH_RS04375_+1aa_orf|NC_005956_1010233_1009622_-1_TTG_203
14 Jun 2017 09:37:49,181 INFO : Inserting BH_RS04375|rso|ens|geno|+3aa_chemg|prod|NC_005956_1010230_1009622_-1_ATG_202
14 Jun 2017 09:37:49,480 INFO : Inserting BH_RS05885|rso|ens|geno|chemg|prod|NC_005956_1352974_1352192_-1_GTG_260
14 Jun 2017 09:37:49,889 INFO : Inserting BH_RS06435|geno|chemg|prod|NC_005956_1503851_1503621_-3_ATG_76
14 Jun 2017 09:37:50,363 INFO : Inserting BH_RS06460|prod|NC_005956_1509467_1509709_+2_ATG_80
14 Jun 2017 09:37:50,477 INFO : Inserting BH_RS06550_p_+196aa_rso|ens|geno|chemg|prod|NC_005956_1530764_1532368_+2_ATG_534
14 Jun 2017 09:37:51,040 INFO : Inserting BH_RS07170_p_+280aa_rso|ens|geno|prod|NC_005956_1657853_1658998_+2_ATG_381
14 Jun 2017 09:37:51,437 INFO : Inserting BH_RS07235|+3aa_chemg|prod|NC_005956_1673314_1672901_-1_TTG_137
14 Jun 2017 09:37:51,764 INFO : Inserting BH_RS07350_-2aa_prod|NC_005956_1689912_1690343_+3_ATG_143
14 Jun 2017 09:37:51,853 INFO : Inserting BH_RS07350|rso|ens|geno|chemg|-2aa_prod|NC_005956_1689906_1690343_+3_ATG_145
14 Jun 2017 09:37:52,104 INFO : Inserting BH_RS08145|chemg|prod|NC_005956_1870496_1870317_-3_ATG_59
14 Jun 2017 09:37:52,412 INFO : Inserting BH_RS08360_p_+94aa_rso|ens|geno|prod|NC_005956_1919910_1921160_+3_ATG_416
14 Jun 2017 09:37:53,153 INFO : Inserting BHPROD|MQB277_1485255_1483354_-1_ATG_633
14 Jun 2017 09:37:53,847 INFO : Inserting BH_RS05910_p|chemg|prod|NC_005956_1359604_1358879_-1_ATG_241
14 Jun 2017 09:37:54,534 INFO : Inserting BH_RS06340_p|rso|ens|geno_fCDS_p|chemg|prod|NC_005956_1462346_1459863_-3_ATG_827
14 Jun 2017 09:37:55,014 INFO : Inserting iRT-C18
14 Jun 2017 09:38:05,445 INFO : Completed import of Skyline document from 20170612_Bartonella_referencePeptides_2017-06-12_13-01-06.sky.zip
14 Jun 2017 09:38:05,451 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2017/Wollscheid%20-%20Bartonella_Proteogenomics/@files/export/xar/experiments_and_runs.xar.exploded/Run17376/20170612_Bartonella_referencePeptides_2017-06-12_13-01-06.sky.zip into the system
14 Jun 2017 09:38:05,451 INFO : Done importing xar
14 Jun 2017 09:38:05,456 INFO : Loading pages and webpart properties
14 Jun 2017 09:38:05,501 INFO : Done importing pages and webpart properties
14 Jun 2017 09:38:05,501 INFO : 
14 Jun 2017 09:38:05,501 INFO : Experiment import completed successfully.
14 Jun 2017 09:38:05,501 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentImportTask'
14 Jun 2017 09:38:05,513 INFO : Starting to run task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask' at location 'webserver'
14 Jun 2017 09:38:05,513 INFO : 
14 Jun 2017 09:38:05,513 INFO : Finishing up experiment copy.
14 Jun 2017 09:38:05,515 INFO : Creating a new TargetedMS experiment entry in targetedms.ExperimentAnnotations.
14 Jun 2017 09:38:05,520 INFO : Updating access URL to point to the new copy of the data.
14 Jun 2017 09:38:05,555 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask'