17 Feb 2017 11:05:12,960 INFO : Copying experiment "Inactivation of iron-sulfur cluster biogenesis regulator SufR in Synechocystis sp. PCC 6803 induces unique iron-dependent protein-level responses" from folder /University of Turku - Plant Biology/SufR-SRM project to /Panorama Public/2017/UTurku - SufR-SRM
17 Feb 2017 11:05:12,961 INFO : =======================================
17 Feb 2017 11:05:12,996 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentExportTask' at location 'webserver'
17 Feb 2017 11:05:12,999 INFO : 
17 Feb 2017 11:05:12,999 INFO : Exporting experiment.
17 Feb 2017 11:05:17,625 INFO : 
17 Feb 2017 11:05:17,625 INFO : Experiment export completed successfully.
17 Feb 2017 11:05:17,625 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentExportTask'
17 Feb 2017 11:05:17,690 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentImportTask' at location 'webserver'
17 Feb 2017 11:05:17,690 INFO : 
17 Feb 2017 11:05:17,690 INFO : Importing experiment.
17 Feb 2017 11:05:17,721 WARN : Import of groups outside of project context not supported.
17 Feb 2017 11:05:17,730 INFO : Loading folder properties (folder type, settings and active modules)
17 Feb 2017 11:05:17,831 INFO : Done importing folder properties (folder type, settings and active modules)
17 Feb 2017 11:05:17,836 INFO : Loading container specific module properties
17 Feb 2017 11:05:17,847 INFO : Done importing container specific module properties
17 Feb 2017 11:05:17,880 INFO : Loading wikis
17 Feb 2017 11:05:17,883 INFO : 0 wikis imported
17 Feb 2017 11:05:17,883 INFO : Done importing wikis
17 Feb 2017 11:05:17,889 INFO : Loading xar
17 Feb 2017 11:05:18,531 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-2778:TargetedMS.ImportSkyZip'
17 Feb 2017 11:05:18,539 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-2778:TargetedMS.ImportSkyZip.Core'
17 Feb 2017 11:05:18,547 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-2778:TargetedMS.ImportSkyZip.Output'
17 Feb 2017 11:05:18,547 DEBUG: Protocol import complete
17 Feb 2017 11:05:18,567 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-2778:Enzyme-level+response+to+the+inactivation+of+iron-sulfur+cluster+biogenesis+regulator+SufR+in+Synechocystis+sp.+PCC+6803'
17 Feb 2017 11:05:18,567 DEBUG: Experiment/Run group import complete
17 Feb 2017 11:05:18,610 DEBUG: Protocol action set import complete
17 Feb 2017 11:05:18,643 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-2778:TargetedMS.ImportSkyZip'
17 Feb 2017 11:05:18,754 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-2778:79136cf0-59fd-1033-97ff-3013bb9b8581'
17 Feb 2017 11:05:18,755 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-2778:TargetedMS.ImportSkyZip.Core'
17 Feb 2017 11:05:18,789 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-2778:TargetedMS.ImportSkyZip.Output'
17 Feb 2017 11:05:18,791 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-2778:79136d9b-59fd-1033-97ff-3013bb9b8581'
17 Feb 2017 11:05:18,793 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2017/UTurku%20-%20SufR-SRM/@files/export/xar/experiments_and_runs.xar.exploded/Run3154/SufR-SRM_2015-10-21_12-50-22.sky.zip into the system
17 Feb 2017 11:05:18,800 INFO : Starting import from SufR-SRM_2015-10-21_12-50-22.sky.zip
17 Feb 2017 11:05:18,819 INFO : Starting to import Skyline document from SufR-SRM_2015-10-21_12-50-22.sky.zip
17 Feb 2017 11:05:18,820 INFO : Expanding CID_splib.blib
17 Feb 2017 11:05:18,842 INFO : Expanding CID_splib.redundant.blib
17 Feb 2017 11:05:19,273 INFO : Expanding HCD_lib.blib
17 Feb 2017 11:05:19,274 INFO : Expanding HCD_lib.redundant.blib
17 Feb 2017 11:05:19,279 INFO : Expanding SufR-SRM.skyd
17 Feb 2017 11:05:19,647 INFO : Expanding SufR-SRM.sky.view
17 Feb 2017 11:05:19,647 INFO : Expanding SufR-SRM.sky
17 Feb 2017 11:05:19,705 WARN : The version of this Skyline document is 3.1. This is newer than the highest supported version 2.62
17 Feb 2017 11:05:19,943 INFO : Inserting sll0088
17 Feb 2017 11:05:20,253 INFO : Inserting slr0148
17 Feb 2017 11:05:20,635 INFO : Inserting sll0158
17 Feb 2017 11:05:20,967 INFO : Inserting sll0169
17 Feb 2017 11:05:21,218 INFO : Inserting sll0184
17 Feb 2017 11:05:21,660 INFO : Inserting sll0208
17 Feb 2017 11:05:22,055 INFO : Inserting sll0209
17 Feb 2017 11:05:22,471 INFO : Inserting sll0223
17 Feb 2017 11:05:22,839 INFO : Inserting sll0247
17 Feb 2017 11:05:23,136 INFO : Inserting sll0248
17 Feb 2017 11:05:23,514 INFO : Inserting sll0306
17 Feb 2017 11:05:23,746 INFO : Inserting sll0427
17 Feb 2017 11:05:24,093 INFO : Inserting sll0520
17 Feb 2017 11:05:24,493 INFO : Inserting sll0542
17 Feb 2017 11:05:24,871 INFO : Inserting sll0550
17 Feb 2017 11:05:25,270 INFO : Inserting sll0567
17 Feb 2017 11:05:25,543 INFO : Inserting sll0662
17 Feb 2017 11:05:25,808 INFO : Inserting sll0698
17 Feb 2017 11:05:26,040 INFO : Inserting sll0728
17 Feb 2017 11:05:26,406 INFO : Inserting sll0741
17 Feb 2017 11:05:26,682 INFO : Inserting sll0813
17 Feb 2017 11:05:26,917 INFO : Inserting sll0823
17 Feb 2017 11:05:27,194 INFO : Inserting sll0849
17 Feb 2017 11:05:27,577 INFO : Inserting sll0920
17 Feb 2017 11:05:27,948 INFO : Inserting sll1031
17 Feb 2017 11:05:28,325 INFO : Inserting sll1057
17 Feb 2017 11:05:28,552 INFO : Inserting sll1196
17 Feb 2017 11:05:28,839 INFO : Inserting sll1221
17 Feb 2017 11:05:29,226 INFO : Inserting sll1223
17 Feb 2017 11:05:29,466 INFO : Inserting sll1226
17 Feb 2017 11:05:29,711 INFO : Inserting sll1316
17 Feb 2017 11:05:30,045 INFO : Inserting sll1341
17 Feb 2017 11:05:30,414 INFO : Inserting sll1356
17 Feb 2017 11:05:30,758 INFO : Inserting sll1382
17 Feb 2017 11:05:31,002 INFO : Inserting sll1398
17 Feb 2017 11:05:31,232 INFO : Inserting sll1406
17 Feb 2017 11:05:31,550 INFO : Inserting sll1423
17 Feb 2017 11:05:31,933 INFO : Inserting sll1454
17 Feb 2017 11:05:32,185 INFO : Inserting sll1521
17 Feb 2017 11:05:32,549 INFO : Inserting sll1525
17 Feb 2017 11:05:32,924 INFO : Inserting sll1578
17 Feb 2017 11:05:33,307 INFO : Inserting sll1621
17 Feb 2017 11:05:33,648 INFO : Inserting sll1625
17 Feb 2017 11:05:34,012 INFO : Inserting sll1626
17 Feb 2017 11:05:34,269 INFO : Inserting sll1734
17 Feb 2017 11:05:34,615 INFO : Inserting sll1831
17 Feb 2017 11:05:34,870 INFO : Inserting sll1878
17 Feb 2017 11:05:35,110 INFO : Inserting slr0009
17 Feb 2017 11:05:35,492 INFO : Inserting slr0074
17 Feb 2017 11:05:35,893 INFO : Inserting slr0075
17 Feb 2017 11:05:36,238 INFO : Inserting slr0076
17 Feb 2017 11:05:36,596 INFO : Inserting slr0077
17 Feb 2017 11:05:36,827 INFO : Inserting slr0150
17 Feb 2017 11:05:37,114 INFO : Inserting slr0327
17 Feb 2017 11:05:37,344 INFO : Inserting slr0335
17 Feb 2017 11:05:37,744 INFO : Inserting slr0342
17 Feb 2017 11:05:38,097 INFO : Inserting slr0348
17 Feb 2017 11:05:38,336 INFO : Inserting slr0387
17 Feb 2017 11:05:38,572 INFO : Inserting slr0417
17 Feb 2017 11:05:38,931 INFO : Inserting slr0513
17 Feb 2017 11:05:39,184 INFO : Inserting slr0600
17 Feb 2017 11:05:39,551 INFO : Inserting slr0623
17 Feb 2017 11:05:39,812 INFO : Inserting slr0653
17 Feb 2017 11:05:40,173 INFO : Inserting slr0665
17 Feb 2017 11:05:40,374 INFO : Inserting slr0737
17 Feb 2017 11:05:40,598 INFO : Inserting slr0963
17 Feb 2017 11:05:40,942 INFO : Inserting slr1139
17 Feb 2017 11:05:41,283 INFO : Inserting slr1239
17 Feb 2017 11:05:41,873 INFO : Inserting slr1289
17 Feb 2017 11:05:42,107 INFO : Inserting slr1295
17 Feb 2017 11:05:42,447 INFO : Inserting slr1302
17 Feb 2017 11:05:42,781 INFO : Inserting slr1311
17 Feb 2017 11:05:43,010 INFO : Inserting slr1329
17 Feb 2017 11:05:43,347 INFO : Inserting slr1379
17 Feb 2017 11:05:43,587 INFO : Inserting slr1392
17 Feb 2017 11:05:43,823 INFO : Inserting slr1417
17 Feb 2017 11:05:44,031 INFO : Inserting slr1511
17 Feb 2017 11:05:44,366 INFO : Inserting slr1562
17 Feb 2017 11:05:44,688 INFO : Inserting slr1643
17 Feb 2017 11:05:45,016 INFO : Inserting slr1835
17 Feb 2017 11:05:45,355 INFO : Inserting slr1843
17 Feb 2017 11:05:45,684 INFO : Inserting slr1890
17 Feb 2017 11:05:46,039 INFO : Inserting slr1894
17 Feb 2017 11:05:46,377 INFO : Inserting slr1963
17 Feb 2017 11:05:46,721 INFO : Inserting slr2033
17 Feb 2017 11:05:47,061 INFO : Inserting slr2067
17 Feb 2017 11:05:47,385 INFO : Inserting slr2082
17 Feb 2017 11:05:47,721 INFO : Inserting slr2094
17 Feb 2017 11:05:48,042 INFO : Inserting slr2136
17 Feb 2017 11:05:48,391 INFO : Inserting slr2143
17 Feb 2017 11:05:48,715 INFO : Inserting ssl0563
17 Feb 2017 11:05:49,127 INFO : Inserting ssl2982
17 Feb 2017 11:05:49,704 INFO : Inserting ssl3044
17 Feb 2017 11:05:49,927 INFO : Inserting ssr3451
17 Feb 2017 11:05:50,164 INFO : Completed import of Skyline document from SufR-SRM_2015-10-21_12-50-22.sky.zip
17 Feb 2017 11:05:50,172 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2017/UTurku%20-%20SufR-SRM/@files/export/xar/experiments_and_runs.xar.exploded/Run3154/SufR-SRM_2015-10-21_12-50-22.sky.zip into the system
17 Feb 2017 11:05:50,172 INFO : Done importing xar
17 Feb 2017 11:05:50,185 INFO : Loading pages and webpart properties
17 Feb 2017 11:05:50,252 INFO : Done importing pages and webpart properties
17 Feb 2017 11:05:50,253 INFO : 
17 Feb 2017 11:05:50,253 INFO : Experiment import completed successfully.
17 Feb 2017 11:05:50,253 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentImportTask'
17 Feb 2017 11:05:50,272 INFO : Starting to run task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask' at location 'webserver'
17 Feb 2017 11:05:50,272 INFO : 
17 Feb 2017 11:05:50,272 INFO : Finishing up experiment copy.
17 Feb 2017 11:05:50,275 INFO : Creating a new TargetedMS experiment entry in targetedms.ExperimentAnnotations.
17 Feb 2017 11:05:50,310 INFO : Updating access URL to point to the new copy of the data.
17 Feb 2017 11:05:50,384 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask'