20 Nov 2017 10:13:36,995 INFO : Copying experiment "Quantification of Site-Specific Protein Lysine Acetylation and Succinylation Stoichiometry using Data-Independent Acquisitions (DIA) Mass Spectrometry --Protocol Example" from folder /Schilling/Jove to /Panorama Public/2017/Schilling - JoVEsuccBSA
20 Nov 2017 10:13:36,995 INFO : =======================================
20 Nov 2017 10:13:37,094 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentExportTask' at location 'webserver'
20 Nov 2017 10:13:37,096 INFO :
20 Nov 2017 10:13:37,096 INFO : Exporting experiment.
20 Nov 2017 10:13:42,833 INFO :
20 Nov 2017 10:13:42,833 INFO : Experiment export completed successfully.
20 Nov 2017 10:13:42,833 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentExportTask'
20 Nov 2017 10:13:42,859 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentImportTask' at location 'webserver'
20 Nov 2017 10:13:42,859 INFO :
20 Nov 2017 10:13:42,859 INFO : Importing experiment.
20 Nov 2017 10:13:42,896 INFO : Loading folder properties (folder type, settings and active modules)
20 Nov 2017 10:13:43,131 INFO : Done importing folder properties (folder type, settings and active modules)
20 Nov 2017 10:13:43,136 INFO : Loading container specific module properties
20 Nov 2017 10:13:43,162 INFO : Done importing container specific module properties
20 Nov 2017 10:13:43,191 INFO : Loading xar
20 Nov 2017 10:13:43,465 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-3651:TargetedMS.ImportSkyZip'
20 Nov 2017 10:13:43,474 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-3651:TargetedMS.ImportSkyZip.Core'
20 Nov 2017 10:13:43,482 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-3651:TargetedMS.ImportSkyZip.Output'
20 Nov 2017 10:13:43,482 DEBUG: Protocol import complete
20 Nov 2017 10:13:43,514 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-3651:JoVE'
20 Nov 2017 10:13:43,514 DEBUG: Experiment/Run group import complete
20 Nov 2017 10:13:43,624 DEBUG: Protocol action set import complete
20 Nov 2017 10:13:43,708 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3651:TargetedMS.ImportSkyZip'
20 Nov 2017 10:13:43,919 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-3651:f91f77d3-a573-1035-b638-3013bb9bc193'
20 Nov 2017 10:13:43,919 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3651:TargetedMS.ImportSkyZip.Core'
20 Nov 2017 10:13:43,927 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3651:TargetedMS.ImportSkyZip.Output'
20 Nov 2017 10:13:43,929 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-3651:f91f77f7-a573-1035-b638-3013bb9bc193'
20 Nov 2017 10:13:43,931 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2017/Schilling%20-%20JoVEsuccBSA/@files/export/xar/experiments_and_runs.xar.exploded/Run23854/Stoichiometry_mascotIDs_Jove_1106_2017_v2_2017-11-06_15-35-08.sky.zip into the system
20 Nov 2017 10:13:43,951 INFO : Starting import from Stoichiometry_mascotIDs_Jove_1106_2017_v2_2017-11-06_15-35-08.sky.zip
20 Nov 2017 10:13:43,968 INFO : Starting to import Skyline document from Stoichiometry_mascotIDs_Jove_1106_2017_v2_2017-11-06_15-35-08.sky.zip
20 Nov 2017 10:13:43,969 INFO : Expanding Stoichiometry_mascotIDs_Jove_1106_2017_v2.blib
20 Nov 2017 10:13:43,970 INFO : Expanding Stoichiometry_mascotIDs_Jove_1106_2017_v2.redundant.blib
20 Nov 2017 10:13:43,971 INFO : Expanding Stoichiometry_mascotIDs_Jove_1106_2017_v2.skyd
20 Nov 2017 10:13:44,174 INFO : Expanding Stoichiometry_mascotIDs_Jove_1106_2017_v2.sky.view
20 Nov 2017 10:13:44,175 INFO : Expanding Stoichiometry_mascotIDs_Jove_1106_2017_v2.sky
20 Nov 2017 10:13:44,178 WARN : The version of this Skyline document is 3.72. This is newer than the highest supported version 3.62
20 Nov 2017 10:13:44,713 INFO : Inserting sp|ALBU_BOVIN|
20 Nov 2017 10:13:47,571 INFO : Completed import of Skyline document from Stoichiometry_mascotIDs_Jove_1106_2017_v2_2017-11-06_15-35-08.sky.zip
20 Nov 2017 10:13:47,576 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2017/Schilling%20-%20JoVEsuccBSA/@files/export/xar/experiments_and_runs.xar.exploded/Run23854/Stoichiometry_mascotIDs_Jove_1106_2017_v2_2017-11-06_15-35-08.sky.zip into the system
20 Nov 2017 10:13:47,580 INFO : Done importing xar
20 Nov 2017 10:13:47,583 INFO : Loading wikis
20 Nov 2017 10:13:47,586 INFO : 0 wikis imported
20 Nov 2017 10:13:47,586 INFO : Done importing wikis
20 Nov 2017 10:13:47,591 INFO : Loading pages and webpart properties
20 Nov 2017 10:13:47,615 INFO : Done importing pages and webpart properties
20 Nov 2017 10:13:47,615 INFO :
20 Nov 2017 10:13:47,616 INFO : Experiment import completed successfully.
20 Nov 2017 10:13:47,616 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentImportTask'
20 Nov 2017 10:13:47,624 INFO : Starting to run task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask' at location 'webserver'
20 Nov 2017 10:13:47,624 INFO :
20 Nov 2017 10:13:47,624 INFO : Finishing up experiment copy.
20 Nov 2017 10:13:47,625 INFO : Creating a new TargetedMS experiment entry in targetedms.ExperimentAnnotations.
20 Nov 2017 10:13:47,644 INFO : Updating access URL to point to the new copy of the data.
20 Nov 2017 10:13:47,879 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask'