Copying experiment: DDR panel radiation response: /Panorama Public/2017/Paulovich

Copying experiment: DDR panel radiation response

Paulovich - DDR_assay_panel_radiation_response

Job Status

Created:

2017-10-17 10:13:02

Modified:

2020-04-20 17:05:44

Email:

vsharma@uw.edu

Status:

COMPLETE

Info:

Description:

Copying experiment: DDR panel radiation response

File Path:

/data/labkey/files/Panorama Public/2017/Paulovich - DDR_assay_panel_radiation_response/@files/Experiment_426.log

Files:

Experiment_426.log

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Log File

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17 Oct 2017 10:13:02,751 INFO : Copying experiment "DDR panel radiation response" from folder /Paulovich/Published_datasets/DDR_assay_panel_radiation_response to /Panorama Public/2017/Paulovich - DDR_assay_panel_radiation_response

17 Oct 2017 10:13:02,751 INFO : =======================================

17 Oct 2017 10:13:02,849 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentExportTask' at location 'webserver'

17 Oct 2017 10:13:02,853 INFO :

17 Oct 2017 10:13:02,853 INFO : Exporting experiment.

17 Oct 2017 10:13:07,348 INFO :

17 Oct 2017 10:13:07,348 INFO : Experiment export completed successfully.

17 Oct 2017 10:13:07,348 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentExportTask'

17 Oct 2017 10:13:07,355 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentImportTask' at location 'webserver'

17 Oct 2017 10:13:07,355 INFO :

17 Oct 2017 10:13:07,355 INFO : Importing experiment.

17 Oct 2017 10:13:07,358 INFO : Loading folder properties (folder type, settings and active modules)

17 Oct 2017 10:13:07,416 INFO : Done importing folder properties (folder type, settings and active modules)

17 Oct 2017 10:13:07,418 INFO : Loading container specific module properties

17 Oct 2017 10:13:07,421 INFO : Done importing container specific module properties

17 Oct 2017 10:13:07,424 INFO : Loading queries

17 Oct 2017 10:13:07,479 INFO : 6 queries imported

17 Oct 2017 10:13:07,479 INFO : Done importing queries

17 Oct 2017 10:13:07,481 INFO : Loading xar

17 Oct 2017 10:13:07,734 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-3422:TargetedMS.ImportSkyZip'

17 Oct 2017 10:13:07,737 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-3422:TargetedMS.ImportSkyZip.Core'

17 Oct 2017 10:13:07,740 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-3422:TargetedMS.ImportSkyZip.Output'

17 Oct 2017 10:13:07,740 DEBUG: Protocol import complete

17 Oct 2017 10:13:07,757 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-3422:DDR+panel+radiation+response'

17 Oct 2017 10:13:07,757 DEBUG: Experiment/Run group import complete

17 Oct 2017 10:13:07,769 DEBUG: Protocol action set import complete

17 Oct 2017 10:13:07,780 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3422:TargetedMS.ImportSkyZip'

17 Oct 2017 10:13:07,854 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-3422:925b8cdd-94db-1035-b638-3013bb9bc193'

17 Oct 2017 10:13:07,854 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3422:TargetedMS.ImportSkyZip.Core'

17 Oct 2017 10:13:07,857 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3422:TargetedMS.ImportSkyZip.Output'

17 Oct 2017 10:13:07,857 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-3422:925b8f6f-94db-1035-b638-3013bb9bc193'

17 Oct 2017 10:13:07,864 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3422:TargetedMS.ImportSkyZip'

17 Oct 2017 10:13:07,871 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-3422:c94e02b3-94e8-1035-b638-3013bb9bc193'

17 Oct 2017 10:13:07,871 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3422:TargetedMS.ImportSkyZip.Core'

17 Oct 2017 10:13:07,873 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3422:TargetedMS.ImportSkyZip.Output'

17 Oct 2017 10:13:07,873 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-3422:c94e0634-94e8-1035-b638-3013bb9bc193'

17 Oct 2017 10:13:07,880 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3422:TargetedMS.ImportSkyZip'

17 Oct 2017 10:13:07,886 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-3422:c94e038e-94e8-1035-b638-3013bb9bc193'

17 Oct 2017 10:13:07,886 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3422:TargetedMS.ImportSkyZip.Core'

17 Oct 2017 10:13:07,888 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-3422:TargetedMS.ImportSkyZip.Output'

17 Oct 2017 10:13:07,888 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-3422:c94e0a1e-94e8-1035-b638-3013bb9bc193'

17 Oct 2017 10:13:07,889 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2017/Paulovich%20-%20DDR_assay_panel_radiation_response/@files/export/xar/experiments_and_runs.xar.exploded/Run22316/DDRpanel_022817_curves_v8b_portal_2017-10-16_14-24-18.sky.zip into the system

17 Oct 2017 10:13:07,891 INFO : Starting import from DDRpanel_022817_curves_v8b_portal_2017-10-16_14-24-18.sky.zip

17 Oct 2017 10:13:07,896 INFO : Starting to import Skyline document from DDRpanel_022817_curves_v8b_portal_2017-10-16_14-24-18.sky.zip

17 Oct 2017 10:13:07,896 INFO : Expanding DDRpanel_022817_curves_v8b_portal.skyd

17 Oct 2017 10:13:08,042 INFO : Expanding DDRpanel_022817_curves_v8b_portal.sky.view

17 Oct 2017 10:13:08,042 INFO : Expanding DDRpanel_022817_curves_v8b_portal.sky

17 Oct 2017 10:13:08,114 WARN : The version of this Skyline document is 3.72. This is newer than the highest supported version 3.62

17 Oct 2017 10:13:08,731 INFO : Inserting sp|Q13315|ATM_HUMAN

17 Oct 2017 10:13:15,418 INFO : Inserting sp|Q13535|ATR_HUMAN

17 Oct 2017 10:13:17,710 INFO : Inserting sp|Q8WXE1|ATRIP_HUMAN

17 Oct 2017 10:13:20,091 INFO : Inserting sp|P38398|BRCA1_HUMAN

17 Oct 2017 10:13:21,892 INFO : Inserting sp|P51587|BRCA2_HUMAN

17 Oct 2017 10:13:23,897 INFO : Inserting sp|Q9BX63|FANCJ_HUMAN

17 Oct 2017 10:13:27,224 INFO : Inserting sp|O14757|CHK1_HUMAN

17 Oct 2017 10:13:28,939 INFO : Inserting sp|Q0VG06|FP100_HUMAN

17 Oct 2017 10:13:30,519 INFO : Inserting sp|O15360|FANCA_HUMAN

17 Oct 2017 10:13:31,900 INFO : Inserting sp|Q9NVI1|FANCI_HUMAN

17 Oct 2017 10:13:33,002 INFO : Inserting sp|P39748|FEN1_HUMAN

17 Oct 2017 10:13:33,869 INFO : Inserting sp|P09211|GSTP1_HUMAN

17 Oct 2017 10:13:35,590 INFO : Inserting sp|P05412|JUN_HUMAN

17 Oct 2017 10:13:37,404 INFO : Inserting sp|Q14676|MDC1_HUMAN

17 Oct 2017 10:13:39,205 INFO : Inserting sp|O60934|NBN_HUMAN

17 Oct 2017 10:13:42,578 INFO : Inserting sp|Q86YC2|PALB2_HUMAN

17 Oct 2017 10:13:44,155 INFO : Inserting sp|P09874|PARP1_HUMAN

17 Oct 2017 10:13:46,089 INFO : Inserting sp|P12004|PCNA_HUMAN

17 Oct 2017 10:13:49,426 INFO : Inserting sp|Q9NS91|RAD18_HUMAN

17 Oct 2017 10:13:52,431 INFO : Inserting sp|P54727|RD23B_HUMAN

17 Oct 2017 10:13:54,532 INFO : Inserting sp|Q92878|RAD50_HUMAN

17 Oct 2017 10:13:55,501 INFO : Inserting sp|O43502|RA51C_HUMAN

17 Oct 2017 10:13:57,519 INFO : Inserting sp|P06400|RB_HUMAN

17 Oct 2017 10:13:59,452 INFO : Inserting sp|O60673|DPOLZ_HUMAN

17 Oct 2017 10:14:01,481 INFO : Inserting sp|Q5UIP0|RIF1_HUMAN

17 Oct 2017 10:14:02,719 INFO : Inserting sp|P31350|RIR2_HUMAN

17 Oct 2017 10:14:04,719 INFO : Inserting sp|Q15554|TERF2_HUMAN

17 Oct 2017 10:14:06,591 INFO : Inserting sp|Q92547|TOPB1_HUMAN

17 Oct 2017 10:14:09,765 INFO : Inserting sp|O00762|UBE2C_HUMAN

17 Oct 2017 10:14:11,381 INFO : Inserting sp|P63279|UBC9_HUMAN

17 Oct 2017 10:14:12,184 INFO : Inserting sp|Q9NPD8|UBE2T_HUMAN

17 Oct 2017 10:14:20,602 INFO : Completed import of Skyline document from DDRpanel_022817_curves_v8b_portal_2017-10-16_14-24-18.sky.zip

17 Oct 2017 10:14:20,607 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2017/Paulovich%20-%20DDR_assay_panel_radiation_response/@files/export/xar/experiments_and_runs.xar.exploded/Run22316/DDRpanel_022817_curves_v8b_portal_2017-10-16_14-24-18.sky.zip into the system

17 Oct 2017 10:14:20,607 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2017/Paulovich%20-%20DDR_assay_panel_radiation_response/@files/export/xar/experiments_and_runs.xar.exploded/Run22317/DDRpanel_022317_PBMC_IR_2017-10-16_14-54-21.sky.zip into the system

17 Oct 2017 10:14:20,609 INFO : Starting import from DDRpanel_022317_PBMC_IR_2017-10-16_14-54-21.sky.zip

17 Oct 2017 10:14:20,612 INFO : Starting to import Skyline document from DDRpanel_022317_PBMC_IR_2017-10-16_14-54-21.sky.zip

17 Oct 2017 10:14:20,612 INFO : Expanding DDRpanel_022317_PBMC_IR.skyd

17 Oct 2017 10:14:20,739 INFO : Expanding DDRpanel_022317_PBMC_IR.sky.view

17 Oct 2017 10:14:20,739 INFO : Expanding DDRpanel_022317_PBMC_IR.sky

17 Oct 2017 10:14:20,770 WARN : The version of this Skyline document is 3.72. This is newer than the highest supported version 3.62

17 Oct 2017 10:14:21,603 INFO : Inserting sp|Q13315|ATM_HUMAN

17 Oct 2017 10:14:26,754 INFO : Inserting sp|Q13535|ATR_HUMAN

17 Oct 2017 10:14:28,711 INFO : Inserting sp|Q8WXE1|ATRIP_HUMAN

17 Oct 2017 10:14:30,650 INFO : Inserting sp|P38398|BRCA1_HUMAN

17 Oct 2017 10:14:32,257 INFO : Inserting sp|P51587|BRCA2_HUMAN

17 Oct 2017 10:14:34,146 INFO : Inserting sp|Q9BX63|FANCJ_HUMAN

17 Oct 2017 10:14:37,584 INFO : Inserting sp|O14757|CHK1_HUMAN

17 Oct 2017 10:14:39,101 INFO : Inserting sp|Q0VG06|FP100_HUMAN

17 Oct 2017 10:14:40,510 INFO : Inserting sp|O15360|FANCA_HUMAN

17 Oct 2017 10:14:41,548 INFO : Inserting sp|Q9NVI1|FANCI_HUMAN

17 Oct 2017 10:14:42,526 INFO : Inserting sp|P39748|FEN1_HUMAN

17 Oct 2017 10:14:43,187 INFO : Inserting sp|P09211|GSTP1_HUMAN

17 Oct 2017 10:14:44,039 INFO : Inserting sp|P05412|JUN_HUMAN

17 Oct 2017 10:14:45,516 INFO : Inserting sp|Q14676|MDC1_HUMAN

17 Oct 2017 10:14:46,989 INFO : Inserting sp|O60934|NBN_HUMAN

17 Oct 2017 10:14:49,956 INFO : Inserting sp|Q86YC2|PALB2_HUMAN

17 Oct 2017 10:14:51,274 INFO : Inserting sp|P09874|PARP1_HUMAN

17 Oct 2017 10:14:53,067 INFO : Inserting sp|P12004|PCNA_HUMAN

17 Oct 2017 10:14:55,615 INFO : Inserting sp|Q9NS91|RAD18_HUMAN

17 Oct 2017 10:14:58,834 INFO : Inserting sp|P54727|RD23B_HUMAN

17 Oct 2017 10:15:00,697 INFO : Inserting sp|Q92878|RAD50_HUMAN

17 Oct 2017 10:15:01,513 INFO : Inserting sp|O43502|RA51C_HUMAN

17 Oct 2017 10:15:03,533 INFO : Inserting sp|P06400|RB_HUMAN

17 Oct 2017 10:15:05,385 INFO : Inserting sp|O60673|DPOLZ_HUMAN

17 Oct 2017 10:15:07,302 INFO : Inserting sp|Q5UIP0|RIF1_HUMAN

17 Oct 2017 10:15:08,399 INFO : Inserting sp|P31350|RIR2_HUMAN

17 Oct 2017 10:15:09,375 INFO : Inserting sp|Q15554|TERF2_HUMAN

17 Oct 2017 10:15:11,105 INFO : Inserting sp|Q92547|TOPB1_HUMAN

17 Oct 2017 10:15:14,621 INFO : Inserting sp|O00762|UBE2C_HUMAN

17 Oct 2017 10:15:16,140 INFO : Inserting sp|P63279|UBC9_HUMAN

17 Oct 2017 10:15:16,907 INFO : Inserting sp|Q9NPD8|UBE2T_HUMAN

17 Oct 2017 10:15:23,472 INFO : Completed import of Skyline document from DDRpanel_022317_PBMC_IR_2017-10-16_14-54-21.sky.zip

17 Oct 2017 10:15:23,476 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2017/Paulovich%20-%20DDR_assay_panel_radiation_response/@files/export/xar/experiments_and_runs.xar.exploded/Run22317/DDRpanel_022317_PBMC_IR_2017-10-16_14-54-21.sky.zip into the system

17 Oct 2017 10:15:23,476 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2017/Paulovich%20-%20DDR_assay_panel_radiation_response/@files/export/xar/experiments_and_runs.xar.exploded/Run22318/DDRpanel_022317_LCLstudy_07_panorama_2017-10-16_14-54-43.sky.zip into the system

17 Oct 2017 10:15:23,478 INFO : Starting import from DDRpanel_022317_LCLstudy_07_panorama_2017-10-16_14-54-43.sky.zip

17 Oct 2017 10:15:23,481 INFO : Starting to import Skyline document from DDRpanel_022317_LCLstudy_07_panorama_2017-10-16_14-54-43.sky.zip

17 Oct 2017 10:15:23,481 INFO : Expanding DDRpanel_022317_LCLstudy_07_panorama.skyd

17 Oct 2017 10:15:23,646 INFO : Expanding DDRpanel_022317_LCLstudy_07_panorama.sky.view

17 Oct 2017 10:15:23,647 INFO : Expanding DDRpanel_022317_LCLstudy_07_panorama.sky

17 Oct 2017 10:15:23,699 WARN : The version of this Skyline document is 3.72. This is newer than the highest supported version 3.62

17 Oct 2017 10:15:24,230 INFO : Inserting sp|Q13315|ATM_HUMAN

17 Oct 2017 10:15:31,889 INFO : Inserting sp|Q13535|ATR_HUMAN

17 Oct 2017 10:15:35,189 INFO : Inserting sp|Q8WXE1|ATRIP_HUMAN

17 Oct 2017 10:15:38,974 INFO : Inserting sp|P38398|BRCA1_HUMAN

17 Oct 2017 10:15:41,912 INFO : Inserting sp|P51587|BRCA2_HUMAN

17 Oct 2017 10:15:45,098 INFO : Inserting sp|Q9BX63|FANCJ_HUMAN

17 Oct 2017 10:15:51,278 INFO : Inserting sp|O14757|CHK1_HUMAN

17 Oct 2017 10:15:54,233 INFO : Inserting sp|Q0VG06|FP100_HUMAN

17 Oct 2017 10:15:56,801 INFO : Inserting sp|O15360|FANCA_HUMAN

17 Oct 2017 10:15:58,460 INFO : Inserting sp|Q9NVI1|FANCI_HUMAN

17 Oct 2017 10:16:00,122 INFO : Inserting sp|P39748|FEN1_HUMAN

17 Oct 2017 10:16:01,315 INFO : Inserting sp|P09211|GSTP1_HUMAN

17 Oct 2017 10:16:02,733 INFO : Inserting sp|P05412|JUN_HUMAN

17 Oct 2017 10:16:05,298 INFO : Inserting sp|Q14676|MDC1_HUMAN

17 Oct 2017 10:16:08,015 INFO : Inserting sp|O60934|NBN_HUMAN

17 Oct 2017 10:16:12,633 INFO : Inserting sp|Q86YC2|PALB2_HUMAN

17 Oct 2017 10:16:14,827 INFO : Inserting sp|P09874|PARP1_HUMAN

17 Oct 2017 10:16:17,997 INFO : Inserting sp|P12004|PCNA_HUMAN

17 Oct 2017 10:16:22,270 INFO : Inserting sp|Q9NS91|RAD18_HUMAN

17 Oct 2017 10:16:27,033 INFO : Inserting sp|P54727|RD23B_HUMAN

17 Oct 2017 10:16:30,378 INFO : Inserting sp|Q92878|RAD50_HUMAN

17 Oct 2017 10:16:31,818 INFO : Inserting sp|O43502|RA51C_HUMAN

17 Oct 2017 10:16:34,926 INFO : Inserting sp|P06400|RB_HUMAN

17 Oct 2017 10:16:37,657 INFO : Inserting sp|O60673|DPOLZ_HUMAN

17 Oct 2017 10:16:40,479 INFO : Inserting sp|Q5UIP0|RIF1_HUMAN

17 Oct 2017 10:16:42,271 INFO : Inserting sp|P31350|RIR2_HUMAN

17 Oct 2017 10:16:43,677 INFO : Inserting sp|Q15554|TERF2_HUMAN

17 Oct 2017 10:16:46,245 INFO : Inserting sp|Q92547|TOPB1_HUMAN

17 Oct 2017 10:16:52,040 INFO : Inserting sp|O00762|UBE2C_HUMAN

17 Oct 2017 10:16:54,429 INFO : Inserting sp|P63279|UBC9_HUMAN

17 Oct 2017 10:16:55,597 INFO : Inserting sp|Q9NPD8|UBE2T_HUMAN

17 Oct 2017 10:17:04,253 INFO : Completed import of Skyline document from DDRpanel_022317_LCLstudy_07_panorama_2017-10-16_14-54-43.sky.zip

17 Oct 2017 10:17:04,258 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2017/Paulovich%20-%20DDR_assay_panel_radiation_response/@files/export/xar/experiments_and_runs.xar.exploded/Run22318/DDRpanel_022317_LCLstudy_07_panorama_2017-10-16_14-54-43.sky.zip into the system

17 Oct 2017 10:17:04,262 INFO : Done importing xar

17 Oct 2017 10:17:04,264 INFO : Loading wikis

17 Oct 2017 10:17:04,314 INFO : 0 wikis imported

17 Oct 2017 10:17:04,314 INFO : Done importing wikis

17 Oct 2017 10:17:04,317 INFO : Loading pages and webpart properties

17 Oct 2017 10:17:04,377 INFO : Done importing pages and webpart properties

17 Oct 2017 10:17:04,377 INFO :

17 Oct 2017 10:17:04,377 INFO : Experiment import completed successfully.

17 Oct 2017 10:17:04,377 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentImportTask'

17 Oct 2017 10:17:04,432 INFO : Starting to run task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask' at location 'webserver'

17 Oct 2017 10:17:04,432 INFO :

17 Oct 2017 10:17:04,432 INFO : Finishing up experiment copy.

17 Oct 2017 10:17:04,433 INFO : Creating a new TargetedMS experiment entry in targetedms.ExperimentAnnotations.

17 Oct 2017 10:17:04,451 INFO : Updating access URL to point to the new copy of the data.

17 Oct 2017 10:17:04,474 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask'