03 Mar 2017 11:37:10,988 INFO : Copying experiment "Spatially and temporally resolved protein interaction networks in living cells." from folder /UCSF - Krogan Lab/GPCR-APEX to /Panorama Public/2017/Krogan - GPCR-APEX
03 Mar 2017 11:37:10,989 INFO : =======================================
03 Mar 2017 11:37:11,022 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentExportTask' at location 'webserver'
03 Mar 2017 11:37:11,025 INFO : 
03 Mar 2017 11:37:11,025 INFO : Exporting experiment.
03 Mar 2017 11:37:14,339 INFO : 
03 Mar 2017 11:37:14,339 INFO : Experiment export completed successfully.
03 Mar 2017 11:37:14,339 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentExportTask'
03 Mar 2017 11:37:14,363 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentImportTask' at location 'webserver'
03 Mar 2017 11:37:14,363 INFO : 
03 Mar 2017 11:37:14,363 INFO : Importing experiment.
03 Mar 2017 11:37:14,372 WARN : Import of groups outside of project context not supported.
03 Mar 2017 11:37:14,375 INFO : Loading folder properties (folder type, settings and active modules)
03 Mar 2017 11:37:14,405 INFO : Done importing folder properties (folder type, settings and active modules)
03 Mar 2017 11:37:14,407 INFO : Loading container specific module properties
03 Mar 2017 11:37:14,412 INFO : Done importing container specific module properties
03 Mar 2017 11:37:14,414 INFO : Loading wikis
03 Mar 2017 11:37:14,425 INFO : 0 wikis imported
03 Mar 2017 11:37:14,425 INFO : Done importing wikis
03 Mar 2017 11:37:14,427 INFO : Loading xar
03 Mar 2017 11:37:14,952 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-2887:TargetedMS.ImportSkyZip'
03 Mar 2017 11:37:14,960 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-2887:TargetedMS.ImportSkyZip.Core'
03 Mar 2017 11:37:14,967 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-2887:TargetedMS.ImportSkyZip.Output'
03 Mar 2017 11:37:14,967 DEBUG: Protocol import complete
03 Mar 2017 11:37:14,971 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-2887:Spatially+and+temporally+resolved+protein+interaction+networks+in+living+cells.'
03 Mar 2017 11:37:14,971 DEBUG: Experiment/Run group import complete
03 Mar 2017 11:37:15,003 DEBUG: Protocol action set import complete
03 Mar 2017 11:37:15,036 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-2887:TargetedMS.ImportSkyZip'
03 Mar 2017 11:37:15,138 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-2887:6084cb17-bc34-1034-b3cf-3013bb9bea77'
03 Mar 2017 11:37:15,138 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-2887:TargetedMS.ImportSkyZip.Core'
03 Mar 2017 11:37:15,146 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-2887:TargetedMS.ImportSkyZip.Output'
03 Mar 2017 11:37:15,147 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-2887:6084cd30-bc34-1034-b3cf-3013bb9bea77'
03 Mar 2017 11:37:15,163 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-2887:TargetedMS.ImportSkyZip'
03 Mar 2017 11:37:15,179 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-2887:3d469c97-bc21-1034-b3cf-3013bb9bea77'
03 Mar 2017 11:37:15,179 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-2887:TargetedMS.ImportSkyZip.Core'
03 Mar 2017 11:37:15,184 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-2887:TargetedMS.ImportSkyZip.Output'
03 Mar 2017 11:37:15,185 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-2887:3d469cf9-bc21-1034-b3cf-3013bb9bea77'
03 Mar 2017 11:37:15,187 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2017/Krogan%20-%20GPCR-APEX/@files/export/xar/experiments_and_runs.xar.exploded/Run13025/GPCR-APEX_B2AR_DOR_quant_2017-01-13_19-11-22.sky.zip into the system
03 Mar 2017 11:37:15,192 INFO : Starting import from GPCR-APEX_B2AR_DOR_quant_2017-01-13_19-11-22.sky.zip
03 Mar 2017 11:37:15,208 INFO : Starting to import Skyline document from GPCR-APEX_B2AR_DOR_quant_2017-01-13_19-11-22.sky.zip
03 Mar 2017 11:37:15,208 INFO : Expanding Braden_DOR_old.blib
03 Mar 2017 11:37:15,210 INFO : Expanding Braden_B2AR_FLAG_test.blib
03 Mar 2017 11:37:15,211 INFO : Expanding Braden_DOR.blib
03 Mar 2017 11:37:15,212 INFO : Expanding GPCR-APEX_B2AR_DOR_quant.skyd
03 Mar 2017 11:37:15,725 INFO : Expanding GPCR-APEX_B2AR_DOR_quant.sky.view
03 Mar 2017 11:37:15,725 INFO : Expanding GPCR-APEX_B2AR_DOR_quant.sky
03 Mar 2017 11:37:15,851 WARN : The version of this Skyline document is 3.6. This is newer than the highest supported version 2.62
03 Mar 2017 11:37:16,166 INFO : Inserting ADRB2
03 Mar 2017 11:37:16,956 INFO : Inserting AGFG1
03 Mar 2017 11:37:18,250 INFO : Inserting AP2A1
03 Mar 2017 11:37:19,259 INFO : Inserting AP2B1
03 Mar 2017 11:37:20,180 INFO : Inserting AP2M1
03 Mar 2017 11:37:21,190 INFO : Inserting APEX
03 Mar 2017 11:37:22,922 INFO : Inserting APPL1
03 Mar 2017 11:37:23,542 INFO : Inserting ARRB2
03 Mar 2017 11:37:24,526 INFO : Inserting ATP6V0A1
03 Mar 2017 11:37:25,886 INFO : Inserting ATP6V1A
03 Mar 2017 11:37:27,244 INFO : Inserting ATP6V1E1
03 Mar 2017 11:37:28,288 INFO : Inserting ATP6V1G1
03 Mar 2017 11:37:28,584 INFO : Inserting CENPF
03 Mar 2017 11:37:29,621 INFO : Inserting CLCC1
03 Mar 2017 11:37:30,589 INFO : Inserting CLTA
03 Mar 2017 11:37:31,891 INFO : Inserting CLTC
03 Mar 2017 11:37:33,226 INFO : Inserting CYLD
03 Mar 2017 11:37:33,869 INFO : Inserting DNM1L
03 Mar 2017 11:37:34,860 INFO : Inserting DSG1
03 Mar 2017 11:37:35,790 INFO : Inserting EMC1
03 Mar 2017 11:37:37,158 INFO : Inserting EPN2
03 Mar 2017 11:37:37,805 INFO : Inserting GNAI2
03 Mar 2017 11:37:39,078 INFO : Inserting GNAS
03 Mar 2017 11:37:39,399 INFO : Inserting GPS1
03 Mar 2017 11:37:39,712 INFO : Inserting ITSN2
03 Mar 2017 11:37:41,042 INFO : Inserting KIAA0196
03 Mar 2017 11:37:41,717 INFO : Inserting LAMP1
03 Mar 2017 11:37:42,786 INFO : Inserting LAMTOR1
03 Mar 2017 11:37:43,745 INFO : Inserting MYOF
03 Mar 2017 11:37:44,464 INFO : Inserting NAPG
03 Mar 2017 11:37:45,509 INFO : Inserting NPLOC4
03 Mar 2017 11:37:46,225 INFO : Inserting PICALM
03 Mar 2017 11:37:47,687 INFO : Inserting POLR3A
03 Mar 2017 11:37:48,073 INFO : Inserting PROX1
03 Mar 2017 11:37:48,435 INFO : Inserting RPL18A
03 Mar 2017 11:37:49,761 INFO : Inserting RPL28
03 Mar 2017 11:37:51,128 INFO : Inserting RPL3
03 Mar 2017 11:37:52,468 INFO : Inserting RPL35A
03 Mar 2017 11:37:53,433 INFO : Inserting RPL6
03 Mar 2017 11:37:54,739 INFO : Inserting RRAGC
03 Mar 2017 11:37:55,101 INFO : Inserting SCAMP3
03 Mar 2017 11:37:56,081 INFO : Inserting SEC31A
03 Mar 2017 11:37:57,101 INFO : Inserting SNX27
03 Mar 2017 11:37:58,390 INFO : Inserting SORT1
03 Mar 2017 11:37:59,064 INFO : Inserting SPCS2
03 Mar 2017 11:37:59,988 INFO : Inserting SSSCA1
03 Mar 2017 11:38:00,310 INFO : Inserting SUPT6H
03 Mar 2017 11:38:00,649 INFO : Inserting TFRC
03 Mar 2017 11:38:02,030 INFO : Inserting TGFBRAP1
03 Mar 2017 11:38:02,668 INFO : Inserting TMED9
03 Mar 2017 11:38:03,304 INFO : Inserting TMEM55B
03 Mar 2017 11:38:03,936 INFO : Inserting TOM1
03 Mar 2017 11:38:04,860 INFO : Inserting TOP1
03 Mar 2017 11:38:05,915 INFO : Inserting VAMP8
03 Mar 2017 11:38:06,553 INFO : Inserting VPS26A
03 Mar 2017 11:38:07,824 INFO : Inserting VPS29
03 Mar 2017 11:38:09,140 INFO : Inserting VPS35
03 Mar 2017 11:38:10,453 INFO : Inserting WWP2
03 Mar 2017 11:38:11,115 INFO : Inserting XP32
03 Mar 2017 11:38:12,074 INFO : Inserting ZFYVE20
03 Mar 2017 11:38:12,756 INFO : Completed import of Skyline document from GPCR-APEX_B2AR_DOR_quant_2017-01-13_19-11-22.sky.zip
03 Mar 2017 11:38:12,765 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2017/Krogan%20-%20GPCR-APEX/@files/export/xar/experiments_and_runs.xar.exploded/Run13025/GPCR-APEX_B2AR_DOR_quant_2017-01-13_19-11-22.sky.zip into the system
03 Mar 2017 11:38:12,765 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2017/Krogan%20-%20GPCR-APEX/@files/export/xar/experiments_and_runs.xar.exploded/Run13019/GPCR-APEX_B2AR_DOR_localization_quant_2017-01-13_17-59-19.sky.zip into the system
03 Mar 2017 11:38:12,771 INFO : Starting import from GPCR-APEX_B2AR_DOR_localization_quant_2017-01-13_17-59-19.sky.zip
03 Mar 2017 11:38:12,778 INFO : Starting to import Skyline document from GPCR-APEX_B2AR_DOR_localization_quant_2017-01-13_17-59-19.sky.zip
03 Mar 2017 11:38:12,778 INFO : Expanding Braden_DOR_old.blib
03 Mar 2017 11:38:12,779 INFO : Expanding Braden_B2AR_FLAG_test.blib
03 Mar 2017 11:38:12,780 INFO : Expanding Braden_DOR.blib
03 Mar 2017 11:38:12,780 INFO : Expanding GPCR-APEX_B2AR_DOR_localization_quant.skyd
03 Mar 2017 11:38:12,955 INFO : Expanding GPCR-APEX_B2AR_DOR_localization_quant.sky.view
03 Mar 2017 11:38:12,955 INFO : Expanding GPCR-APEX_B2AR_DOR_localization_quant.sky
03 Mar 2017 11:38:12,974 WARN : The version of this Skyline document is 3.6. This is newer than the highest supported version 2.62
03 Mar 2017 11:38:13,283 INFO : Inserting EEA1
03 Mar 2017 11:38:13,851 INFO : Inserting OCLN
03 Mar 2017 11:38:14,202 INFO : Inserting RDX
03 Mar 2017 11:38:14,490 INFO : Inserting RPL18A
03 Mar 2017 11:38:14,849 INFO : Inserting RPL28
03 Mar 2017 11:38:15,244 INFO : Inserting RPL3
03 Mar 2017 11:38:15,605 INFO : Inserting RPL35A
03 Mar 2017 11:38:15,873 INFO : Inserting RPL6
03 Mar 2017 11:38:16,205 INFO : Inserting VTI1B
03 Mar 2017 11:38:16,401 INFO : Completed import of Skyline document from GPCR-APEX_B2AR_DOR_localization_quant_2017-01-13_17-59-19.sky.zip
03 Mar 2017 11:38:27,120 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2017/Krogan%20-%20GPCR-APEX/@files/export/xar/experiments_and_runs.xar.exploded/Run13019/GPCR-APEX_B2AR_DOR_localization_quant_2017-01-13_17-59-19.sky.zip into the system
03 Mar 2017 11:38:27,120 INFO : Done importing xar
03 Mar 2017 11:38:27,125 INFO : Loading pages and webpart properties
03 Mar 2017 11:38:27,188 INFO : Done importing pages and webpart properties
03 Mar 2017 11:38:27,188 INFO : 
03 Mar 2017 11:38:27,188 INFO : Experiment import completed successfully.
03 Mar 2017 11:38:27,188 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentImportTask'
03 Mar 2017 11:38:27,200 INFO : Starting to run task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask' at location 'webserver'
03 Mar 2017 11:38:27,200 INFO : 
03 Mar 2017 11:38:27,200 INFO : Finishing up experiment copy.
03 Mar 2017 11:38:27,202 INFO : Creating a new TargetedMS experiment entry in targetedms.ExperimentAnnotations.
03 Mar 2017 11:38:27,205 INFO : Updating access URL to point to the new copy of the data.
03 Mar 2017 11:38:27,234 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask'