Copying expriment: MS1 Peptide Ion Intensity Chromatograms in MS2 (SWATH) Data Independent Acquisitions. Improving Post Acquisition Analysis of Proteomic Experiments: /Panorama Public/2015/Schilling

Copying expriment: MS1 Peptide Ion Intensity Chromatograms in MS2 (SWATH) Data Independent Acquisitions. Improving Post Acquisition Analysis of Proteomic Experiments

Schilling - MS1_MS2_SWATH

Job Status

Created:

2015-06-18 21:54:09

Modified:

2020-04-20 16:55:36

Email:

vsharma@uw.edu

Status:

COMPLETE

Info:

Description:

Copying expriment: MS1 Peptide Ion Intensity Chromatograms in MS2 (SWATH) Data Independent Acquisitions. Improving Post Acquisition Analysis of Proteomic Experiments

File Path:

/data/labkey/files/Panorama Public/2015/Schilling - MS1_MS2_SWATH/@files/Experiment_83.log

Files:

Experiment_83.log

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18 Jun 2015 21:54:09,453 INFO : Copying experiment "MS1 Peptide Ion Intensity Chromatograms in MS2 (SWATH) Data Independent Acquisitions. Improving Post Acquisition Analysis of Proteomic Experiments" from folder /Schilling/MS1_MS2_SWATH to /Panorama Public/2015/Schilling - MS1_MS2_SWATH

18 Jun 2015 21:54:09,454 INFO : =======================================

18 Jun 2015 21:54:09,583 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentExportTask' at location 'webserver'

18 Jun 2015 21:54:09,585 INFO :

18 Jun 2015 21:54:09,585 INFO : Exporting experiment.

18 Jun 2015 21:56:03,486 INFO :

18 Jun 2015 21:56:03,487 INFO : Experiment export completed successfully.

18 Jun 2015 21:56:03,487 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentExportTask'

18 Jun 2015 21:56:03,516 INFO : Starting to run task 'org.labkey.targetedms.pipeline.ExperimentImportTask' at location 'webserver'

18 Jun 2015 21:56:03,517 INFO :

18 Jun 2015 21:56:03,517 INFO : Importing experiment.

18 Jun 2015 21:56:03,525 INFO : Loading folder properties (folder type, settings and active modules)

18 Jun 2015 21:56:03,639 INFO : Done importing folder properties (folder type, settings and active modules)

18 Jun 2015 21:56:03,645 INFO : Done importing container specific module properties

18 Jun 2015 21:56:03,651 INFO : Loading wikis

18 Jun 2015 21:56:03,822 INFO : 1 wiki imported

18 Jun 2015 21:56:03,823 INFO : Done importing wikis

18 Jun 2015 21:56:03,829 INFO : Loading xar

18 Jun 2015 21:56:18,674 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip'

18 Jun 2015 21:56:18,677 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip.Core'

18 Jun 2015 21:56:18,680 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip.Output'

18 Jun 2015 21:56:18,680 DEBUG: Protocol import complete

18 Jun 2015 21:56:18,681 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-1079:MS1+Peptide+Ion+Intensity+Chromatograms+in+MS2+%28SWATH%29+Data+Independent+Acquisitions.+Improving+Post+Acquisition+Analysis+of+Proteomic+Experiments'

18 Jun 2015 21:56:18,681 DEBUG: Experiment/Run group import complete

18 Jun 2015 21:56:18,695 DEBUG: Protocol action set import complete

18 Jun 2015 21:56:18,712 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip'

18 Jun 2015 21:56:18,819 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-1079:0bfcacaa-a32a-1032-9c51-3013bb9bcc66'

18 Jun 2015 21:56:18,819 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip.Core'

18 Jun 2015 21:56:18,826 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip.Output'

18 Jun 2015 21:56:18,828 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-1079:0bfcaccc-a32a-1032-9c51-3013bb9bcc66'

18 Jun 2015 21:56:18,852 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip'

18 Jun 2015 21:56:18,880 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-1079:0bfcad67-a32a-1032-9c51-3013bb9bcc66'

18 Jun 2015 21:56:18,880 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip.Core'

18 Jun 2015 21:56:18,886 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip.Output'

18 Jun 2015 21:56:18,888 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-1079:0bfcad74-a32a-1032-9c51-3013bb9bcc66'

18 Jun 2015 21:56:18,907 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip'

18 Jun 2015 21:56:18,922 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-1079:0bfcaeb4-a32a-1032-9c51-3013bb9bcc66'

18 Jun 2015 21:56:18,922 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip.Core'

18 Jun 2015 21:56:18,928 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip.Output'

18 Jun 2015 21:56:18,929 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-1079:0bfcaec7-a32a-1032-9c51-3013bb9bcc66'

18 Jun 2015 21:56:18,946 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip'

18 Jun 2015 21:56:18,960 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-1079:0bfcaf46-a32a-1032-9c51-3013bb9bcc66'

18 Jun 2015 21:56:18,960 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip.Core'

18 Jun 2015 21:56:18,966 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip.Output'

18 Jun 2015 21:56:18,967 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-1079:0bfcaf53-a32a-1032-9c51-3013bb9bcc66'

18 Jun 2015 21:56:18,985 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip'

18 Jun 2015 21:56:18,999 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-1079:0bfcafc8-a32a-1032-9c51-3013bb9bcc66'

18 Jun 2015 21:56:19,000 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip.Core'

18 Jun 2015 21:56:19,005 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip.Output'

18 Jun 2015 21:56:19,007 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-1079:0bfcaff2-a32a-1032-9c51-3013bb9bcc66'

18 Jun 2015 21:56:19,024 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip'

18 Jun 2015 21:56:19,038 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-1079:e3b4666f-98df-1032-b843-3013bb9b1d5e'

18 Jun 2015 21:56:19,038 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip.Core'

18 Jun 2015 21:56:19,043 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip.Output'

18 Jun 2015 21:56:19,045 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-1079:e3b46784-98df-1032-b843-3013bb9b1d5e'

18 Jun 2015 21:56:19,062 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip'

18 Jun 2015 21:56:19,075 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-1079:e3b46e0c-98df-1032-b843-3013bb9b1d5e'

18 Jun 2015 21:56:19,076 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip.Core'

18 Jun 2015 21:56:19,081 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip.Output'

18 Jun 2015 21:56:19,082 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-1079:e3b46e18-98df-1032-b843-3013bb9b1d5e'

18 Jun 2015 21:56:19,099 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip'

18 Jun 2015 21:56:19,113 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-1079:e3b467f1-98df-1032-b843-3013bb9b1d5e'

18 Jun 2015 21:56:19,113 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip.Core'

18 Jun 2015 21:56:19,118 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-1079:TargetedMS.ImportSkyZip.Output'

18 Jun 2015 21:56:19,120 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-1079:e3b4681c-98df-1032-b843-3013bb9b1d5e'

18 Jun 2015 21:56:19,122 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MS1_MS2_SWATH/@files/export/xar/experiments_and_runs.xar.exploded/Run1145/Phospho_isomer_response_ratios_16to1_1to16_2015-03-02_10-09-21.sky.zip into the system

18 Jun 2015 21:56:19,125 INFO : Starting import from Phospho_isomer_response_ratios_16to1_1to16_2015-03-02_10-09-21.sky.zip

18 Jun 2015 21:56:19,134 INFO : Starting to import Skyline document from Phospho_isomer_response_ratios_16to1_1to16_2015-03-02_10-09-21.sky.zip

18 Jun 2015 21:56:19,134 INFO : Expanding DCA_MLD_60to10_R1.blib

18 Jun 2015 21:56:19,135 INFO : Expanding Phospho_isomer_response_ratios_16to1_1to16.skyd

18 Jun 2015 21:56:19,143 INFO : Expanding Phospho_isomer_response_ratios_16to1_1to16.sky.view

18 Jun 2015 21:56:19,143 INFO : Expanding Phospho_isomer_response_ratios_16to1_1to16.sky

18 Jun 2015 21:56:19,432 INFO : Inserting pyruvate dehydrogenase 1alpha

18 Jun 2015 21:56:19,513 INFO : Inserting pyruvate dehydrogenase 1alpha

18 Jun 2015 21:56:19,728 INFO : Completed import of Skyline document from Phospho_isomer_response_ratios_16to1_1to16_2015-03-02_10-09-21.sky.zip

18 Jun 2015 21:56:19,736 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MS1_MS2_SWATH/@files/export/xar/experiments_and_runs.xar.exploded/Run1145/Phospho_isomer_response_ratios_16to1_1to16_2015-03-02_10-09-21.sky.zip into the system

18 Jun 2015 21:56:19,736 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MS1_MS2_SWATH/@files/export/xar/experiments_and_runs.xar.exploded/Run1146/Phospho_isomer_response_ratios_8to1_1to8_2015-03-02_10-10-11.sky.zip into the system

18 Jun 2015 21:56:19,739 INFO : Starting import from Phospho_isomer_response_ratios_8to1_1to8_2015-03-02_10-10-11.sky.zip

18 Jun 2015 21:56:19,746 INFO : Starting to import Skyline document from Phospho_isomer_response_ratios_8to1_1to8_2015-03-02_10-10-11.sky.zip

18 Jun 2015 21:56:19,747 INFO : Expanding DCA_MLD_60to10_R1.blib

18 Jun 2015 21:56:19,747 INFO : Expanding Phospho_isomer_response_ratios_8to1_1to8.skyd

18 Jun 2015 21:56:19,757 INFO : Expanding Phospho_isomer_response_ratios_8to1_1to8.sky.view

18 Jun 2015 21:56:19,758 INFO : Expanding Phospho_isomer_response_ratios_8to1_1to8.sky

18 Jun 2015 21:56:19,971 INFO : Inserting pyruvate dehydrogenase 1alpha

18 Jun 2015 21:56:20,021 INFO : Inserting pyruvate dehydrogenase 1alpha

18 Jun 2015 21:56:20,097 INFO : Completed import of Skyline document from Phospho_isomer_response_ratios_8to1_1to8_2015-03-02_10-10-11.sky.zip

18 Jun 2015 21:56:20,105 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MS1_MS2_SWATH/@files/export/xar/experiments_and_runs.xar.exploded/Run1146/Phospho_isomer_response_ratios_8to1_1to8_2015-03-02_10-10-11.sky.zip into the system

18 Jun 2015 21:56:20,105 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MS1_MS2_SWATH/@files/export/xar/experiments_and_runs.xar.exploded/Run1147/Phospho_isomer_response_ratios_4to1_1to4_2015-03-02_10-10-51.sky.zip into the system

18 Jun 2015 21:56:20,108 INFO : Starting import from Phospho_isomer_response_ratios_4to1_1to4_2015-03-02_10-10-51.sky.zip

18 Jun 2015 21:56:20,115 INFO : Starting to import Skyline document from Phospho_isomer_response_ratios_4to1_1to4_2015-03-02_10-10-51.sky.zip

18 Jun 2015 21:56:20,115 INFO : Expanding DCA_MLD_60to10_R1.blib

18 Jun 2015 21:56:20,116 INFO : Expanding Phospho_isomer_response_ratios_4to1_1to4.skyd

18 Jun 2015 21:56:20,126 INFO : Expanding Phospho_isomer_response_ratios_4to1_1to4.sky.view

18 Jun 2015 21:56:20,127 INFO : Expanding Phospho_isomer_response_ratios_4to1_1to4.sky

18 Jun 2015 21:56:20,244 INFO : Inserting pyruvate dehydrogenase 1alpha

18 Jun 2015 21:56:20,294 INFO : Inserting pyruvate dehydrogenase 1alpha

18 Jun 2015 21:56:20,356 INFO : Completed import of Skyline document from Phospho_isomer_response_ratios_4to1_1to4_2015-03-02_10-10-51.sky.zip

18 Jun 2015 21:56:20,364 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MS1_MS2_SWATH/@files/export/xar/experiments_and_runs.xar.exploded/Run1147/Phospho_isomer_response_ratios_4to1_1to4_2015-03-02_10-10-51.sky.zip into the system

18 Jun 2015 21:56:20,364 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MS1_MS2_SWATH/@files/export/xar/experiments_and_runs.xar.exploded/Run1148/Phospho_isomer_response_ratios_1to2_2015-03-02_10-11-17.sky.zip into the system

18 Jun 2015 21:56:20,367 INFO : Starting import from Phospho_isomer_response_ratios_1to2_2015-03-02_10-11-17.sky.zip

18 Jun 2015 21:56:20,374 INFO : Starting to import Skyline document from Phospho_isomer_response_ratios_1to2_2015-03-02_10-11-17.sky.zip

18 Jun 2015 21:56:20,374 INFO : Expanding DCA_MLD_60to10_R1.blib

18 Jun 2015 21:56:20,375 INFO : Expanding Phospho_isomer_response_ratios_1to2.skyd

18 Jun 2015 21:56:20,380 INFO : Expanding Phospho_isomer_response_ratios_1to2.sky.view

18 Jun 2015 21:56:20,381 INFO : Expanding Phospho_isomer_response_ratios_1to2.sky

18 Jun 2015 21:56:20,480 INFO : Inserting pyruvate dehydrogenase 1alpha

18 Jun 2015 21:56:20,514 INFO : Inserting pyruvate dehydrogenase 1alpha

18 Jun 2015 21:56:20,555 INFO : Completed import of Skyline document from Phospho_isomer_response_ratios_1to2_2015-03-02_10-11-17.sky.zip

18 Jun 2015 21:56:20,562 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MS1_MS2_SWATH/@files/export/xar/experiments_and_runs.xar.exploded/Run1148/Phospho_isomer_response_ratios_1to2_2015-03-02_10-11-17.sky.zip into the system

18 Jun 2015 21:56:20,563 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MS1_MS2_SWATH/@files/export/xar/experiments_and_runs.xar.exploded/Run1149/Phospho_isomer_response_ratios_1to1_2015-03-02_10-11-55.sky.zip into the system

18 Jun 2015 21:56:20,566 INFO : Starting import from Phospho_isomer_response_ratios_1to1_2015-03-02_10-11-55.sky.zip

18 Jun 2015 21:56:20,572 INFO : Starting to import Skyline document from Phospho_isomer_response_ratios_1to1_2015-03-02_10-11-55.sky.zip

18 Jun 2015 21:56:20,573 INFO : Expanding DCA_MLD_60to10_R1.blib

18 Jun 2015 21:56:20,573 INFO : Expanding Phospho_isomer_response_ratios_1to1.skyd

18 Jun 2015 21:56:20,579 INFO : Expanding Phospho_isomer_response_ratios_1to1.sky.view

18 Jun 2015 21:56:20,579 INFO : Expanding Phospho_isomer_response_ratios_1to1.sky

18 Jun 2015 21:56:20,680 INFO : Inserting pyruvate dehydrogenase 1alpha

18 Jun 2015 21:56:20,712 INFO : Inserting pyruvate dehydrogenase 1alpha

18 Jun 2015 21:56:20,753 INFO : Completed import of Skyline document from Phospho_isomer_response_ratios_1to1_2015-03-02_10-11-55.sky.zip

18 Jun 2015 21:56:20,760 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MS1_MS2_SWATH/@files/export/xar/experiments_and_runs.xar.exploded/Run1149/Phospho_isomer_response_ratios_1to1_2015-03-02_10-11-55.sky.zip into the system

18 Jun 2015 21:56:20,761 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MS1_MS2_SWATH/@files/export/xar/experiments_and_runs.xar.exploded/Run1133/3to1_Mito_all_peptides_90min_25Da_SWATH_1021_2014_v3_noDDA_0217_2015_2015-02-17_11-03-05.sky.zip into the system

18 Jun 2015 21:56:20,764 INFO : Starting import from 3to1_Mito_all_peptides_90min_25Da_SWATH_1021_2014_v3_noDDA_0217_2015_2015-02-17_11-03-05.sky.zip

18 Jun 2015 21:56:20,770 INFO : Starting to import Skyline document from 3to1_Mito_all_peptides_90min_25Da_SWATH_1021_2014_v3_noDDA_0217_2015_2015-02-17_11-03-05.sky.zip

18 Jun 2015 21:56:20,771 INFO : Expanding 25Da_Mito_Oct_1019_2014_v1.blib

18 Jun 2015 21:56:20,783 INFO : Expanding 25Da_Mito_Oct_1019_2014_v1.redundant.blib

18 Jun 2015 21:56:20,812 INFO : Expanding 25Da_Mito_Oct_2ndfile.blib

18 Jun 2015 21:56:20,813 INFO : Expanding 25Da_Mito_Oct_2ndfile.redundant.blib

18 Jun 2015 21:56:20,814 INFO : Expanding 3to1_Mito_all_peptides_90min_25Da_SWATH_1021_2014_v3_noDDA_0217_2015.skyd

18 Jun 2015 21:56:34,002 INFO : Expanding 3to1_Mito_all_peptides_90min_25Da_SWATH_1021_2014_v3_noDDA_0217_2015.sky.view

18 Jun 2015 21:56:34,002 INFO : Expanding 3to1_Mito_all_peptides_90min_25Da_SWATH_1021_2014_v3_noDDA_0217_2015.sky

18 Jun 2015 21:56:34,721 INFO : Inserting sp|Q99K67|AASS_MOUSE

18 Jun 2015 21:56:38,494 INFO : Inserting sp|P05202|AATM_MOUSE

18 Jun 2015 21:56:41,129 INFO : Inserting sp|P50544|ACADV_MOUSE

18 Jun 2015 21:56:45,535 INFO : Inserting sp|Q9CQR4|ACO13_MOUSE

18 Jun 2015 21:56:46,261 INFO : Inserting sp|Q99KI0|ACON_MOUSE

18 Jun 2015 21:56:48,500 INFO : Inserting sp|Q9R0H0|ACOX1_MOUSE

18 Jun 2015 21:56:54,004 INFO : Inserting sp|Q8VCW8|ACSF2_MOUSE

18 Jun 2015 21:56:56,497 INFO : Inserting sp|P41216|ACSL1_MOUSE

18 Jun 2015 21:56:59,604 INFO : Inserting sp|Q91VA0|ACSM1_MOUSE

18 Jun 2015 21:57:01,308 INFO : Inserting sp|Q9DBF1|AL7A1_MOUSE

18 Jun 2015 21:57:02,595 INFO : Inserting sp|P47738|ALDH2_MOUSE

18 Jun 2015 21:57:06,665 INFO : Inserting sp|Q03265|ATPA_MOUSE

18 Jun 2015 21:57:10,584 INFO : Inserting sp|P56480|ATPB_MOUSE

18 Jun 2015 21:57:14,119 INFO : Inserting sp|P24270|CATA_MOUSE

18 Jun 2015 21:57:17,657 INFO : Inserting sp|P63038|CH60_MOUSE

18 Jun 2015 21:57:20,860 INFO : Inserting sp|Q8C196|CPSM_MOUSE

18 Jun 2015 21:57:27,188 INFO : Inserting sp|Q8K2B3|DHSA_MOUSE

18 Jun 2015 21:57:28,195 INFO : Inserting sp|Q99LC5|ETFA_MOUSE

18 Jun 2015 21:57:30,208 INFO : Inserting sp|P38647|GRP75_MOUSE

18 Jun 2015 21:57:32,944 INFO : Inserting sp|P54869|HMCS2_MOUSE

18 Jun 2015 21:57:36,497 INFO : Inserting sp|P08249|MDHM_MOUSE

18 Jun 2015 21:57:39,501 INFO : Inserting sp|Q9EQ20|MMSA_MOUSE

18 Jun 2015 21:57:42,932 INFO : Inserting sp|P09103|PDIA1_MOUSE

18 Jun 2015 21:57:44,333 INFO : Inserting sp|Q8QZT1|THIL_MOUSE

18 Jun 2015 21:57:46,543 INFO : Inserting sp|Q8BWT1|THIM_MOUSE

18 Jun 2015 21:57:50,040 INFO : Completed import of Skyline document from 3to1_Mito_all_peptides_90min_25Da_SWATH_1021_2014_v3_noDDA_0217_2015_2015-02-17_11-03-05.sky.zip

18 Jun 2015 21:57:50,048 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MS1_MS2_SWATH/@files/export/xar/experiments_and_runs.xar.exploded/Run1133/3to1_Mito_all_peptides_90min_25Da_SWATH_1021_2014_v3_noDDA_0217_2015_2015-02-17_11-03-05.sky.zip into the system

18 Jun 2015 21:57:50,048 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MS1_MS2_SWATH/@files/export/xar/experiments_and_runs.xar.exploded/Run1135/DCA_MS1_MS2_kinase_inhibitor_study_v2c_2015-02-17_14-32-50.sky.zip into the system

18 Jun 2015 21:57:50,051 INFO : Starting import from DCA_MS1_MS2_kinase_inhibitor_study_v2c_2015-02-17_14-32-50.sky.zip

18 Jun 2015 21:57:50,058 INFO : Starting to import Skyline document from DCA_MS1_MS2_kinase_inhibitor_study_v2c_2015-02-17_14-32-50.sky.zip

18 Jun 2015 21:57:50,058 INFO : Expanding DCA_MLD_60to10_R1.blib

18 Jun 2015 21:57:50,059 INFO : Expanding DCA_MS1_MS2_kinase_inhibitor_study_v2c.skyd

18 Jun 2015 21:57:50,128 INFO : Expanding DCA_MS1_MS2_kinase_inhibitor_study_v2c.sky.view

18 Jun 2015 21:57:50,129 INFO : Expanding DCA_MS1_MS2_kinase_inhibitor_study_v2c.sky

18 Jun 2015 21:57:50,258 INFO : Inserting pyruvate dehydrogenase 1alpha

18 Jun 2015 21:57:51,223 INFO : Inserting pyruvate dehydrogenase 1alpha

18 Jun 2015 21:57:51,583 INFO : Inserting pyruvate dehydrogenase 1alpha

18 Jun 2015 21:57:51,693 INFO : Inserting pyruvate dehydrogenase 1alpha

18 Jun 2015 21:57:51,918 INFO : Completed import of Skyline document from DCA_MS1_MS2_kinase_inhibitor_study_v2c_2015-02-17_14-32-50.sky.zip

18 Jun 2015 21:57:51,925 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MS1_MS2_SWATH/@files/export/xar/experiments_and_runs.xar.exploded/Run1135/DCA_MS1_MS2_kinase_inhibitor_study_v2c_2015-02-17_14-32-50.sky.zip into the system

18 Jun 2015 21:57:51,925 DEBUG: Trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MS1_MS2_SWATH/@files/export/xar/experiments_and_runs.xar.exploded/Run1134/segments_reproducibility_MS2_SWATH_optimization_2015-02-17_12-13-36.sky.zip into the system

18 Jun 2015 21:57:51,928 INFO : Starting import from segments_reproducibility_MS2_SWATH_optimization_2015-02-17_12-13-36.sky.zip

18 Jun 2015 21:57:51,935 INFO : Starting to import Skyline document from segments_reproducibility_MS2_SWATH_optimization_2015-02-17_12-13-36.sky.zip

18 Jun 2015 21:57:51,935 INFO : Expanding mito3.blib

18 Jun 2015 21:57:51,938 INFO : Expanding mito3.redundant.blib

18 Jun 2015 21:57:51,941 INFO : Expanding mito2.blib

18 Jun 2015 21:57:51,941 INFO : Expanding mito2.redundant.blib

18 Jun 2015 21:57:51,942 INFO : Expanding segments_reproducibility_MS2_SWATH_optimization.skyd

18 Jun 2015 21:57:54,640 INFO : Expanding segments_reproducibility_MS2_SWATH_optimization.sky.view

18 Jun 2015 21:57:54,640 INFO : Expanding segments_reproducibility_MS2_SWATH_optimization.sky

18 Jun 2015 21:57:54,836 INFO : Inserting sp|Q61767|3BHS4_MOUSE

18 Jun 2015 21:57:54,978 INFO : Inserting sp|Q61694|3BHS5_MOUSE

18 Jun 2015 21:57:55,156 INFO : Inserting sp|Q99L13|3HIDH_MOUSE

18 Jun 2015 21:57:55,571 INFO : Inserting sp|Q61838|A2M_MOUSE

18 Jun 2015 21:57:55,800 INFO : Inserting sp|Q99PG0|AAAD_MOUSE

18 Jun 2015 21:57:56,308 INFO : Inserting sp|Q99K67|AASS_MOUSE

18 Jun 2015 21:57:56,631 INFO : Inserting sp|P05202|AATM_MOUSE

18 Jun 2015 21:57:59,168 INFO : Inserting sp|P55096|ABCD3_MOUSE

18 Jun 2015 21:57:59,804 INFO : Inserting sp|P51174|ACADL_MOUSE

18 Jun 2015 21:58:00,144 INFO : Inserting sp|P45952|ACADM_MOUSE

18 Jun 2015 21:58:00,463 INFO : Inserting sp|Q07417|ACADS_MOUSE

18 Jun 2015 21:58:00,912 INFO : Inserting sp|Q99KI0|ACON_MOUSE

18 Jun 2015 21:58:01,369 INFO : Inserting sp|Q9R0H0|ACOX1_MOUSE

18 Jun 2015 21:58:02,551 INFO : Inserting sp|Q8VCW8|ACSF2_MOUSE

18 Jun 2015 21:58:03,152 INFO : Inserting sp|P41216|ACSL1_MOUSE

18 Jun 2015 21:58:03,462 INFO : Inserting sp|Q91VA0|ACSM1_MOUSE

18 Jun 2015 21:58:03,886 INFO : Inserting sp|P62737|ACTA_MOUSE

18 Jun 2015 21:58:04,120 INFO : Inserting sp|P68033|ACTC_MOUSE

18 Jun 2015 21:58:04,303 INFO : Inserting sp|P48962|ADT1_MOUSE

18 Jun 2015 21:58:04,663 INFO : Inserting sp|P51881|ADT2_MOUSE

18 Jun 2015 21:58:05,121 INFO : Inserting sp|Q3V132|ADT4_MOUSE

18 Jun 2015 21:58:05,427 INFO : Inserting sp|Q8CHT0|AL4A1_MOUSE

18 Jun 2015 21:58:05,957 INFO : Inserting sp|Q9DBF1|AL7A1_MOUSE

18 Jun 2015 21:58:06,167 INFO : Inserting sp|P07724|ALBU_MOUSE

18 Jun 2015 21:58:06,662 INFO : Inserting sp|P47738|ALDH2_MOUSE

18 Jun 2015 21:58:07,387 INFO : Inserting sp|Q91Y97|ALDOB_MOUSE

18 Jun 2015 21:58:07,787 INFO : Inserting sp|P16460|ASSY_MOUSE

18 Jun 2015 21:58:08,149 INFO : Inserting sp|P97450|ATP5J_MOUSE

18 Jun 2015 21:58:08,314 INFO : Inserting sp|Q03265|ATPA_MOUSE

18 Jun 2015 21:58:08,846 INFO : Inserting sp|Q9D3D9|ATPD_MOUSE

18 Jun 2015 21:58:09,026 INFO : Completed import of Skyline document from segments_reproducibility_MS2_SWATH_optimization_2015-02-17_12-13-36.sky.zip

18 Jun 2015 21:58:09,034 DEBUG: Finished trying to load data file file:/data/labkey/files/Panorama%20Public/2015/Schilling%20-%20MS1_MS2_SWATH/@files/export/xar/experiments_and_runs.xar.exploded/Run1134/segments_reproducibility_MS2_SWATH_optimization_2015-02-17_12-13-36.sky.zip into the system

18 Jun 2015 21:58:09,034 INFO : Done importing xar

18 Jun 2015 21:58:09,041 INFO : Loading custom views

18 Jun 2015 21:58:09,067 INFO : 1 custom view imported

18 Jun 2015 21:58:09,067 INFO : Done importing custom views

18 Jun 2015 21:58:09,074 INFO : Loading pages and webpart properties

18 Jun 2015 21:58:09,129 INFO : Done importing pages and webpart properties

18 Jun 2015 21:58:09,129 INFO :

18 Jun 2015 21:58:09,129 INFO : Experiment import completed successfully.

18 Jun 2015 21:58:09,129 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.ExperimentImportTask'

18 Jun 2015 21:58:09,152 INFO : Starting to run task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask' at location 'webserver'

18 Jun 2015 21:58:09,153 INFO :

18 Jun 2015 21:58:09,153 INFO : Finishing up experiment copy.

18 Jun 2015 21:58:09,156 INFO : Creating a new TargetedMS experiment entry in targetedms.ExperimentAnnotations.

18 Jun 2015 21:58:09,160 INFO : Updating access URL to point to the new copy of the data.

18 Jun 2015 21:58:09,208 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.CopyExperimentFinalTask'